Evidence map›Paper›PMID 25056622›Full record

ArticleProceedings. Biological sciences2014

Molecular analysis of ancient caries.

Marc Simón, Rafael Montiel, Andrea Smerling, Eduvigis Solórzano, Nancy Díaz, Brenda A Álvarez-Sandoval, Andrea R Jiménez-Marín, Assumpció Malgosa

Abstract readHistorical Article
In one paragraph

Article in Proceedings. Biological sciences, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Trial
  2. Article
  3. CcpA and CodY Coordinate Acetate Metabolism in Streptococcus mutans.Applied and environmental microbiology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Marc SimónUnitat d'Antropologia Biològica, Department of Biologia Animal, Biologia Vegetal i Ecologia, Universitat Autònoma de Barcelona, Spain.
Rafael MontielLaboratorio Nacional de Genómica para la Biodiversidad, Unidad de Genómica Avanzada, CINVESTAV-IPN. Km. 9.6 Libramiento Norte Carretera Irapuato - León, Irapuato, Guanajuato, Mexico.ORCID http://orcid.org/0000-0001-8052-0679
Andrea SmerlingUnitat d'Antropologia Biològica, Department of Biologia Animal, Biologia Vegetal i Ecologia, Universitat Autònoma de Barcelona, Spain.
Eduvigis SolórzanoUnitat d'Antropologia Biològica, Department of Biologia Animal, Biologia Vegetal i Ecologia, Universitat Autònoma de Barcelona, Spain.
Nancy DíazUnitat d'Antropologia Biològica, Department of Biologia Animal, Biologia Vegetal i Ecologia, Universitat Autònoma de Barcelona, Spain.
Brenda A Álvarez-SandovalLaboratorio Nacional de Genómica para la Biodiversidad, Unidad de Genómica Avanzada, CINVESTAV-IPN. Km. 9.6 Libramiento Norte Carretera Irapuato - León, Irapuato, Guanajuato, Mexico.
Andrea R Jiménez-MarínLaboratorio Nacional de Genómica para la Biodiversidad, Unidad de Genómica Avanzada, CINVESTAV-IPN. Km. 9.6 Libramiento Norte Carretera Irapuato - León, Irapuato, Guanajuato, Mexico.
Assumpció MalgosaUnitat d'Antropologia Biològica, Department of Biologia Animal, Biologia Vegetal i Ecologia, Universitat Autònoma de Barcelona, Spain assumpcio.malgosa@uab.cat.ORCID http://orcid.org/0000-0003-1723-3671

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An 84 base pair sequence of the Streptococcus mutans virulence factor, known as dextranase, has been obtained from 10 individuals from the Bronze Age to the Modern Era in Europe and from before and after the colonization in America. Modern samples show four polymorphic sites that have not been found in the ancient samples studied so far. The nucleotide and haplotype diversity of this region have increased over time, which could be reflecting the footprint of a population expansion. While this segment has apparently evolved according to neutral evolution, we have been able to detect one site that is under positive selection pressure both in present and past populations. This study is a first step to study the evolution of this microorganism, analysed using direct evidence obtained from ancient remains.

Indexed as

Amino Acid SequenceBase SequenceDental CariesDextranaseHaplotypesHistory, 15th CenturyHistory, 20th CenturyHistory, AncientHistory, MedievalHumansMolecular Sequence DataStreptococcus mutansDextranasedextranaseneutral evolutionpositive selectionStreptococcus mutans

Identifiers

PMID25056622
PMCPMC4123698

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.