Evidence map›Paper›PMID 25056329›Full record

ReviewJournal of clinical microbiology2015

Microbial typing by matrix-assisted laser desorption ionization-time of flight mass spectrometry: do we need guidance for data interpretation?

Sébastien Spinali, Alex van Belkum, Richard V Goering, Victoria Girard, Martin Welker, Marc Van Nuenen, David H Pincus, Maud Arsac, Géraldine Durand

Abstract readReview
In one paragraph

Review in Journal of clinical microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Occurrence of theJournal of clinical microbiology · 2021
    Article
  9. Article
  10. [Usefulness of MALDI-TOF and REP-PCR against PFGE for the epidemiological study of Acinetobacter baumannii].Revista espanola de quimioterapia : publicacion oficial de la Sociedad Espanola de Quimioterapia · 2021
    Article
  11. Article
  12. Characterization ofMicroorganisms · 2020
    Article
  13. Article
  14. Article
  15. Review
  16. Use of MALDI-TOF mass spectrometry to detect nosocomial outbreaks of Serratia marcescens and Citrobacter freundii.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2019
    Article
  17. Fourier transform infrared spectroscopy: unlocking fundamentals and prospects for bacterial strain typing.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2019
    Review
  18. Review
  19. Antimicrobial resistance and infection control · 2019
    Article
  20. Evaluation ofFrontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Sébastien SpinalibioMérieux SA, Unit Microbiology, R&D Microbiology, La Balme Les Grottes, France sebastien.spinali@biomerieux.com.
Alex van BelkumbioMérieux SA, Unit Microbiology, R&D Microbiology, La Balme Les Grottes, France.
Richard V GoeringDepartment of Medical Microbiology and Immunology, Creighton University Medical Center, School of Medicine, Omaha, Nebraska, USA.
Victoria GirardbioMérieux SA, Unit Microbiology, R&D Microbiology, La Balme Les Grottes, France.
Martin WelkerbioMérieux SA, Unit Microbiology, R&D Microbiology, La Balme Les Grottes, France.
Marc Van NuenenbioMérieux Inc., Unit Microbiology, Durham, North Carolina, USA.
David H PincusbioMérieux Inc., St. Louis, Missouri, USA.
Maud ArsacbioMérieux SA, Unit Innovation and Systems, Marcy l'Etoile, France.
Géraldine DurandbioMérieux SA, Unit Microbiology, R&D Microbiology, La Balme Les Grottes, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The integration of matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) in clinical microbiology has revolutionized species identification of bacteria, yeasts, and molds. However, beyond straightforward identification, the method has also been suggested to have the potential for subspecies-level or even type-level epidemiological analyses. This minireview explores MALDI-TOF MS-based typing, which has already been performed on many clinically relevant species. We discuss the limits of the method's resolution and we suggest interpretative criteria allowing valid comparison of strain-specific data. We conclude that guidelines for MALDI-TOF MS-based typing can be developed along the same lines as those used for the interpretation of data from pulsed-field gel electrophoresis (PFGE).

Indexed as

BacteriaBacterial Typing TechniquesFungiGuidelines as TopicHumansMycological Typing TechniquesSpectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization

Identifiers

PMID25056329
PMCPMC4390642

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.