Evidence map›Paper›PMID 25053812›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

The Golgi localized bifunctional UDP-rhamnose/UDP-galactose transporter family of Arabidopsis.

Carsten Rautengarten, Berit Ebert, Ignacio Moreno, Henry Temple, Thomas Herter, Bruce Link, Daniela Doñas-Cofré, Adrián Moreno, Susana Saéz-Aguayo, Francisca Blanco and 8 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
15.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 120 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. NKS1/ELMO4 is an integral protein of a pectin synthesis protein complex and maintains Golgi morphology and cell adhesion inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. ThePlant direct · 2021
    Article

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 7 institutions in 4 countries.

Carsten RautengartenJoint BioEnergy Institute and Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94702;
Berit EbertJoint BioEnergy Institute and Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94702;Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, C 1871, Copenhagen, Denmark;
Ignacio MorenoCentro de Biotecnología Vegetal, Facultad de Ciencias Biológicas, Universidad Andrés Bello, Santiago RM 8370146, Chile;Fondo de Areas Prioritarias Center for Genome Regulation, Santiago RM 8370146, Chile;
Henry TempleCentro de Biotecnología Vegetal, Facultad de Ciencias Biológicas, Universidad Andrés Bello, Santiago RM 8370146, Chile;Fondo de Areas Prioritarias Center for Genome Regulation, Santiago RM 8370146, Chile;
Thomas HerterJoint BioEnergy Institute and Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94702;
Bruce LinkDepartment of Molecular and Cell Biology, University of Connecticut, Storrs, CT 06269;
Daniela Doñas-CofréCentro de Biotecnología Vegetal, Facultad de Ciencias Biológicas, Universidad Andrés Bello, Santiago RM 8370146, Chile;Fondo de Areas Prioritarias Center for Genome Regulation, Santiago RM 8370146, Chile;
Adrián MorenoCentro de Biotecnología Vegetal, Facultad de Ciencias Biológicas, Universidad Andrés Bello, Santiago RM 8370146, Chile;Fondo de Areas Prioritarias Center for Genome Regulation, Santiago RM 8370146, Chile;
Susana Saéz-AguayoCentro de Biotecnología Vegetal, Facultad de Ciencias Biológicas, Universidad Andrés Bello, Santiago RM 8370146, Chile;Fondo de Areas Prioritarias Center for Genome Regulation, Santiago RM 8370146, Chile;
Francisca BlancoCentro de Biotecnología Vegetal, Facultad de Ciencias Biológicas, Universidad Andrés Bello, Santiago RM 8370146, Chile;Fondo de Areas Prioritarias Center for Genome Regulation, Santiago RM 8370146, Chile;
Jennifer C MortimerDepartment of Biochemistry, University of Cambridge, Cambridge CB2 1QW, United Kingdom; and.ORCID http://orcid.org/0000-0001-6624-636X
Alex SchultinkDepartment of Plant and Microbial Biology, University of California, Berkeley, CA 94720.
Wolf-Dieter ReiterDepartment of Molecular and Cell Biology, University of Connecticut, Storrs, CT 06269;
Paul DupreeDepartment of Biochemistry, University of Cambridge, Cambridge CB2 1QW, United Kingdom; and.
Markus PaulyDepartment of Plant and Microbial Biology, University of California, Berkeley, CA 94720.
Joshua L HeazlewoodJoint BioEnergy Institute and Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94702;ORCID http://orcid.org/0000-0002-2080-3826
Henrik V SchellerJoint BioEnergy Institute and Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94702;Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720 hscheller@lbl.gov aorellana@unab.cl.
Ariel OrellanaCentro de Biotecnología Vegetal, Facultad de Ciencias Biológicas, Universidad Andrés Bello, Santiago RM 8370146, Chile;Fondo de Areas Prioritarias Center for Genome Regulation, Santiago RM 8370146, Chile; hscheller@lbl.gov aorellana@unab.cl.
Universidad Andrés Bello · CLUniversity of California, Berkeley · USJoint BioEnergy Institute · USUniversity of Cambridge · GBUniversity of Connecticut · USLawrence Berkeley National Laboratory · USUniversity of Copenhagen · DK

Funding

Biotechnology and Biological Sciences Research Council BB/G016240/1
6 · The paper itself

Abstract

Plant cells are surrounded by a cell wall that plays a key role in plant growth, structural integrity, and defense. The cell wall is a complex and diverse structure that is mainly composed of polysaccharides. The majority of noncellulosic cell wall polysaccharides are produced in the Golgi apparatus from nucleotide sugars that are predominantly synthesized in the cytosol. The transport of these nucleotide sugars from the cytosol into the Golgi lumen is a critical process for cell wall biosynthesis and is mediated by a family of nucleotide sugar transporters (NSTs). Numerous studies have sought to characterize substrate-specific transport by NSTs; however, the availability of certain substrates and a lack of robust methods have proven problematic. Consequently, we have developed a novel approach that combines reconstitution of NSTs into liposomes and the subsequent assessment of nucleotide sugar uptake by mass spectrometry. To address the limitation of substrate availability, we also developed a two-step reaction for the enzymatic synthesis of UDP-l-rhamnose (Rha) by expressing the two active domains of the Arabidopsis UDP-l-Rha synthase. The liposome approach and the newly synthesized substrates were used to analyze a clade of Arabidopsis NSTs, resulting in the identification and characterization of six bifunctional UDP-l-Rha/UDP-d-galactose (Gal) transporters (URGTs). Further analysis of loss-of-function and overexpression plants for two of these URGTs supported their roles in the transport of UDP-l-Rha and UDP-d-Gal for matrix polysaccharide biosynthesis.

Indexed as

Multigene FamilyArabidopsisBiological TransportGolgi ApparatusKineticsMolecular Sequence DataMonosaccharide Transport ProteinsPectinsPhylogenyProteolipidsRhamnoseSubcellular FractionsTime FactorsUDP-Galactose TranslocatorsUridine Diphosphate GlucoseMonosaccharide Transport ProteinsPectinsProteolipidsproteoliposomesRhamnoseUDP-Galactose TranslocatorsUridine Diphosphate Glucosegalactanglycan biosynthesismembrane transportproteoliposomes

Identifiers

PMID25053812
PMCPMC4128141
OpenAlexW1972167106

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.