Evidence map›Paper›PMID 25053706›Full record

ArticleG3 (Bethesda, Md.)2014

Whole-genome sequence of the C57L/J mouse inbred strain.

Guruprasad Ananda, Yuka Takemon, Douglas Hinerfeld, Ron Korstanje

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Accessing Data Resources in the Mouse Phenome Database for Genetic Analysis of Murine Life Span and Health Span.The journals of gerontology. Series A, Biological sciences and medical sciences · 2016
    Article
  5. Collaborative Cross and Diversity Outbred data resources in the Mouse Phenome Database.Mammalian genome : official journal of the International Mammalian Genome Society · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Guruprasad AnandaThe Jackson Laboratory, Bar Harbor, Maine.
Yuka TakemonThe Jackson Laboratory, Bar Harbor, Maine.
Douglas HinerfeldThe Jackson Laboratory, Bar Harbor, Maine.
Ron KorstanjeThe Jackson Laboratory, Bar Harbor, Maine ron.korstanje@jax.org.

Funding

Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI William Carl Skarnes · 1985 to 2026
$61.9M
Mapping Gene Mutations That Alter HDL Cholesterol Levels in MiceR01HL095668 · NHLBI · JACKSON LABORATORY · PI KORSTANJE, RONNY · 2009 to 2013
$2.4M
NCI NIH HHS CA034196NCI NIH HHS P30 CA034196NHLBI NIH HHS HL095668NHLBI NIH HHS R01 HL095668
6 · The paper itself

Abstract

We sequenced the complete genome of the widely used C57L/J mouse inbred strain. With 40× average coverage, we compared the C57L/J sequence with that of the C57BL/6J and identified many known as well as novel private variants. This genome sequence adds another strain to the growing number of mouse inbred strains with complete genome sequences and is a valuable resource to the scientific community.

Indexed as

GenomeAnimalsGenotypeHigh-Throughput Nucleotide SequencingMaleMice, Inbred StrainsMolecular Sequence DataPolymorphism, Single NucleotideSequence AlignmentSequence Analysis, DNASpleengenomemousesequence

Identifiers

PMID25053706
PMCPMC4169161

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.