Evidence map›Paper›PMID 25053647›Full record

ArticleJournal of experimental botany2014

Differential expression patterns of arabinogalactan proteins in Arabidopsis thaliana reproductive tissues.

Ana Marta Pereira, Simona Masiero, Margarida Sofia Nobre, Mário Luís Costa, María-Teresa Solís, Pilar S Testillano, Stefanie Sprunck, Sílvia Coimbra

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
10.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 74 citations in OpenAlex.

  1. Article
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  3. Article
  4. Article
  5. Review
  6. Whole-Genome Sequencing and Analysis of Tumour-Forming Radish (International journal of molecular sciences · 2024
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Hydroxyproline-Frontiers in plant science · 2022
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Spatial and Temporal Distribution of Arabinogalactan Proteins duringInternational journal of molecular sciences · 2021
    Article
  20. Paving the Way for Fertilization: The Role of the Transmitting Tract.International journal of molecular sciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 4 countries.

Ana Marta PereiraDepartamento de Biologia, Faculdade de Ciências da Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal Center for Biodiversity, Functional & Integrative Genomics (BioFIG), Porto, Portugal Dipartimento di BioScienze, Università degli Studi di Milano, 20133 Milan, Italy.
Simona MasieroDipartimento di BioScienze, Università degli Studi di Milano, 20133 Milan, Italy.
Margarida Sofia NobreDepartamento de Biologia, Faculdade de Ciências da Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal.
Mário Luís CostaDepartamento de Biologia, Faculdade de Ciências da Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal Center for Biodiversity, Functional & Integrative Genomics (BioFIG), Porto, Portugal.
María-Teresa SolísPollen Biotechnology of Crop Plants Group, Centro de Investigaciones Biológicas (CIB) CSIC, Ramiro de Maeztu 9, 28040 Madrid, Spain.
Pilar S TestillanoPollen Biotechnology of Crop Plants Group, Centro de Investigaciones Biológicas (CIB) CSIC, Ramiro de Maeztu 9, 28040 Madrid, Spain.
Stefanie SprunckCell Biology and Plant Biochemistry, Biochemie-Zentrum Regensburg, University of Regensburg, Universitätsstraße 31, 93053 Regensburg, Germany.
Sílvia CoimbraDepartamento de Biologia, Faculdade de Ciências da Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal Center for Biodiversity, Functional & Integrative Genomics (BioFIG), Porto, Portugal scoimbra@fc.up.pt.
Universidade do Porto · PTCentro de Investigaciones Biológicas Margarita Salas · ESUniversity of Milan · ITUniversity of Regensburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Arabinogalactan proteins (AGPs) are heavily glycosylated proteins existing in all members of the plant kingdom and are differentially distributed through distinctive developmental stages. Here, we showed the individual distributions of specific Arabidopsis AGPs: AGP1, AGP9, AGP12, AGP15, and AGP23, throughout reproductive tissues and indicated their possible roles in several reproductive processes. AGP genes specifically expressed in female tissues were identified using available microarray data. This selection was confirmed by promoter analysis using multiple green fluorescent protein fusions to a nuclear localization signal, β-glucuronidase fusions, and in situ hybridization as approaches to confirm the expression patterns of the AGPs. Promoter analysis allowed the detection of a specific and differential presence of these proteins along the pathway followed by the pollen tube during its journey to reach the egg and the central cell inside the embryo sac. AGP1 was expressed in the stigma, style, transmitting tract, and the chalazal and funiculus tissues of the ovules. AGP9 was present along the vasculature of the reproductive tissues and AGP12 was expressed in the stigmatic cells, chalazal and funiculus cells of the ovules, and in the septum. AGP15 was expressed in all pistil tissues, except in the transmitting tract, while AGP23 was specific to the pollen grain and pollen tube. The expression pattern of these AGPs provides new evidence for the detection of a subset of specific AGPs involved in plant reproductive processes, being of significance for this field of study. AGPs are prominent candidates for male-female communication during reproduction.

Indexed as

ArabidopsisArabidopsis ProteinsFlowersMucoproteinsPlant ProteinsPollen TubeArabidopsis Proteinsarabinogalactan proteinsMucoproteinsPlant ProteinsArabinogalactan proteinsfemale gametophytefuniculuspistilpollen tube guidancetransmitting tract.

Identifiers

PMID25053647
PMCPMC4400541
OpenAlexW2150292003

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.