Evidence map›Paper›PMID 25053415›Full record

ArticleThe Journal of biological chemistry2014

c-Myc programs fatty acid metabolism and dictates acetyl-CoA abundance and fate.

Lia R Edmunds, Lokendra Sharma, Audry Kang, Jie Lu, Jerry Vockley, Shrabani Basu, Radha Uppala, Eric S Goetzman, Megan E Beck, Donald Scott and 1 more

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 66 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed, 1 pooled it
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 1 synthesis or guideline pooled it, 114 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Fueling the fire-a pan-cancer analysis of MYC-regulated lipid metabolism.Frontiers in cell and developmental biology · 2025
    Review
  5. Review
  6. Review
  7. MYC: there is more to it than cancer.Frontiers in cell and developmental biology · 2024
    Review
  8. Article
  9. Unraveling MYC's Role in Orchestrating Tumor Intrinsic and Tumor Microenvironment Interactions Driving Tumorigenesis and Drug Resistance.Pathophysiology : the official journal of the International Society for Pathophysiology · 2023
    Review
  10. Myc beyond Cancer: Regulation of Mammalian Tissue Regeneration.Pathophysiology : the official journal of the International Society for Pathophysiology · 2023
    Review
  11. Review
  12. Review
  13. MYC-an emerging player in mitochondrial diseases.Frontiers in cell and developmental biology · 2023
    Review
  14. Review
  15. Review
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Lia R EdmundsFrom the Divisions of Hematology/Oncology and.
Lokendra SharmaFrom the Divisions of Hematology/Oncology and.
Audry KangFrom the Divisions of Hematology/Oncology and.
Jie LuFrom the Divisions of Hematology/Oncology and.
Jerry VockleyMedical Genetics, Children's Hospital of Pittsburgh of the University of Pittsburgh Medical Center (UPMC), Pittsburgh, Pennsylvania 15224.
Shrabani BasuMedical Genetics, Children's Hospital of Pittsburgh of the University of Pittsburgh Medical Center (UPMC), Pittsburgh, Pennsylvania 15224.
Radha UppalaMedical Genetics, Children's Hospital of Pittsburgh of the University of Pittsburgh Medical Center (UPMC), Pittsburgh, Pennsylvania 15224.
Eric S GoetzmanMedical Genetics, Children's Hospital of Pittsburgh of the University of Pittsburgh Medical Center (UPMC), Pittsburgh, Pennsylvania 15224.
Megan E BeckMedical Genetics, Children's Hospital of Pittsburgh of the University of Pittsburgh Medical Center (UPMC), Pittsburgh, Pennsylvania 15224.
Donald Scottthe Division of Endocrinology, Diabetes and Bone Disease, Department of Medicine, Mt. Sinai School of Medicine, New York, New York 10029.
Edward V ProchownikFrom the Divisions of Hematology/Oncology and the Department of Microbiology and Molecular Genetics, The University of Pittsburgh, Pittsburgh, Pennsylvania 15219, and the University of Pittsburgh Cancer Institute, Pittsburgh, Pennsylvania 15224 procev@chp.edu.
Children's Hospital of Pittsburgh · USUniversity of Pittsburgh Medical Center · USIcahn School of Medicine at Mount Sinai · USUniversity of Pittsburgh · US

Funding

Regulation of Peroxisomal Metabolism by Lysine AcylationR01DK090242 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GOETZMAN, ERIC S · 2011 to 2024
$5.4M
Inborn Errors of Long Chain Fat MetabolismR01DK078775 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI VOCKLEY, GERARD · 2008 to 2019
$4.5M
Structure-based design of novel low molecular weight c-Myc inhibitorsR01CA140624 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PROCHOWNIK, EDWARD VICTOR · 2009 to 2013
$2.7M
The Role of Myc in ChREBP-dependent, Glucose-stimulated Gene ExpressionR01DK065149 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SCOTT, DONALD K. · 2004 to 2015
$2.6M
Control of Metabolism and Energy-Sensing Pathways by c-MycR01CA174713 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PROCHOWNIK, EDWARD VICTOR · 2014 to 2018
$1.6M
The Role of Myc in ChREBP-dependent, Glucose-stimulated Gene ExpressionR56DK065149 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SCOTT, DONALD K. · 2010 to 2010
$183k
NCI NIH HHS CA140624-05NCI NIH HHS R01 CA140624NCI NIH HHS R01 CA174713NIDDK NIH HHS DK065149NIDDK NIH HHS DK090242NIDDK NIH HHS DK78775NIDDK NIH HHS R01 DK065149NIDDK NIH HHS R01 DK078775NIDDK NIH HHS R01 DK090242NIDDK NIH HHS R56 DK065149
6 · The paper itself

Abstract

myc(-/-) rat fibroblasts (KO cells) differ from myc(+/+) (WT) cells and KO cells with enforced Myc re-expression (KO-Myc cells) with respect to mitochondrial structure and function, utilization of glucose and glutamine as energy-generating substrates, and ATP levels. Specifically, KO cells demonstrate low levels of glycolysis and oxidative phosphorylation, dysfunctional mitochondria and electron transport chain complexes, and depleted ATP stores. We examined here how these cells adapt to their energy-deficient state and how they differ in their uptake and utilization of long- and medium-chain fatty acids such as palmitate and octanoate, respectively. Metabolic tracing of these molecules showed that KO cells preferentially utilize them as β-oxidation substrates and that, rather than directing them into phospholipids, preferentially store them as neutral lipids. KO cell transcriptional profiling and functional assays revealed a generalized up-regulation of pathways involved in fatty acid transport and catabolism as well as evidence that these cells attempt to direct acetyl-CoA into the tricarboxylic acid (TCA) cycle for ATP production rather than utilizing it for anabolic purposes. Additional evidence to support this idea included the finding that AMP-dependent protein kinase was constitutively activated in KO cells. The complex control of pyruvate dehydrogenase, which links glycolysis to the TCA cycle, was also maximized to ensure the conversion of pyruvate to acetyl-CoA. Despite these efforts to maximize acetyl-CoA for energy-generating purposes, its levels remained chronically low in KO cells. This suggests that tumor cells with Myc deregulation might be susceptible to novel therapies that limit acetyl-CoA availability.

Indexed as

Acetyl Coenzyme AAdenosine TriphosphateAMP-Activated Protein KinasesAnimalsBlotting, WesternCell Line, TumorCitric Acid CycleFatty AcidsFibroblastsGene Expression ProfilingGene Knockout TechniquesGlycolysisHumansKetone OxidoreductasesLipid MetabolismMetabolic Networks and PathwaysAcetyl Coenzyme AAdenosine TriphosphateAMP-Activated Protein KinasesFatty AcidsKetone OxidoreductasesProto-Oncogene Proteins c-mycpyruvate dehydrogenase (NADP+)Pyruvic AcidAMP-activated Kinase (AMPK)Electron Transfer ComplexMitochondriaPyruvate Dehydrogenase Complex (PDC)Tricarboxylic Acid Cycle (TCA Cycle) (Krebs cycle)Warburg Effect

Identifiers

PMID25053415
PMCPMC4155699
OpenAlexW2075943620

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.