Evidence map›Paper›PMID 25052312›Full record

ArticleEuropean journal of human genetics : EJHG2015

Homozygous missense variant in the human CNGA3 channel causes cone-rod dystrophy.

Rehan S Shaikh, Peggy Reuter, Robert A Sisk, Tasleem Kausar, Mohsin Shahzad, Muhammad I Maqsood, Ateeq Yousif, Muhammad Ali, Saima Riazuddin, Bernd Wissinger and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 34 citations in OpenAlex.

  1. Novel compound heterozygousExperimental and therapeutic medicine · 2025
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  6. Achromatopsia: Genetics and Gene Therapy.Molecular diagnosis & therapy · 2022
    Review
  7. Review
  8. Article
  9. Sensing through Non-Sensing Ocular Ion Channels.International journal of molecular sciences · 2020
    Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Gene Therapy for Color Blindness.The Yale journal of biology and medicine · 2017
    Review
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Rehan S ShaikhInstitute of Molecular Biology and Biotechnology, Bahauddin Zakariya University, Multan, Pakistan.
Peggy ReuterMolecular Genetics Laboratory, Institute for Ophthalmic Research, University Clinics Tuebingen, Tuebingen, Germany.
Robert A SiskDivision of Pediatric Ophthalmology, Cincinnati Children's Hospital Research Foundation, Cincinnati, OH, USA.
Tasleem KausarInstitute of Molecular Biology and Biotechnology, Bahauddin Zakariya University, Multan, Pakistan.
Mohsin ShahzadDepartment of Otorhinolaryngology Head and Neck Surgery, School of Medicine, University of Maryland, Baltimore, MD, USA.
Muhammad I MaqsoodInstitute of Molecular Biology and Biotechnology, Bahauddin Zakariya University, Multan, Pakistan.
Ateeq YousifInstitute of Ophthalmology, Mayo Hospital, King Edward Medical University, Lahore, Pakistan.
Muhammad AliInstitute of Molecular Biology and Biotechnology, Bahauddin Zakariya University, Multan, Pakistan.
Saima RiazuddinDepartment of Otorhinolaryngology Head and Neck Surgery, School of Medicine, University of Maryland, Baltimore, MD, USA.
Bernd WissingerMolecular Genetics Laboratory, Institute for Ophthalmic Research, University Clinics Tuebingen, Tuebingen, Germany.
Zubair M Ahmed1] Institute of Molecular Biology and Biotechnology, Bahauddin Zakariya University, Multan, Pakistan [2] Department of Otorhinolaryngology Head and Neck Surgery, School of Medicine, University of Maryland, Baltimore, MD, USA.
Bahauddin Zakariya University · PKUniversity of Maryland, Baltimore · USUniversity of Tübingen · DECincinnati Children's Hospital Medical Center · USMayo Hospital · PK

Funding

Usher Proteins in the Inner Ear Structure and FunctionR01DC012564 · NIDCD · UNIVERSITY OF MARYLAND BALTIMORE · PI Zubair M. Ahmed, Gregory I Frolenkov · 2013 to 2026
$7.0M
Functional Analyses of Tricellular Tight Junctions in Hearing and DeafnessR01DC011748 · NIDCD · UNIVERSITY OF MARYLAND BALTIMORE · PI RIAZUDDIN, SAIMA · 2011 to 2015
$1.9M
Identifying Genes for Non-syndromic Recessive Deafness-A Collaborative StudyR01DC011803 · NIDCD · UNIVERSITY OF MARYLAND BALTIMORE · PI RIAZUDDIN, SAIMA · 2012 to 2016
$1.6M
Molecular Genetics of nonsyndromic Oculocutaneous AlbinismR56AR065483 · NIAMS · UNIVERSITY OF MARYLAND BALTIMORE · PI AHMED, ZUBAIR M. · 2014 to 2015
$666k
NIAMS NIH HHS R56 AR065483NIDCD NIH HHS R01 DC011748NIDCD NIH HHS R01 DC011803NIDCD NIH HHS R01 DC012564NIDCD NIH HHS R01DC012564
6 · The paper itself

Abstract

We assessed a large consanguineous Pakistani family (PKAB157) segregating early onset low vision problems. Funduscopic and electroretinographic evaluation of affected individuals revealed juvenile cone-rod dystrophy (CRD) with maculopathy. Other clinical symptoms included loss of color discrimination, photophobia and nystagmus. Whole-exome sequencing, segregation and haplotype analyses demonstrated that a transition variant (c.955T>C; p.(Cys319Arg)) in CNGA3 co-segregated with the CRD phenotype in family PKAB157. The ability of CNGA3 channel to influx calcium in response to agonist, when expressed either alone or together with the wild-type CNGB3 subunit in HEK293 cells, was completely abolished due to p.Cys319Arg variant. Western blotting and immunolocalization studies suggest that a decreased channel density in the HEK293 cell membrane due to impaired folding and/or trafficking of the CNGA3 protein is the main pathogenic effect of the p.Cys319Arg variant. Mutant alleles of the human cone photoreceptor cyclic nucleotide-gated channel (CNGA3) are frequently associated with achromatopsia. In rare cases, variants in CNGA3 are also associated with cone dystrophy, Leber's congenital amaurosis and oligo cone trichromacy. The identification of predicted p.(Cys319Arg) missense variant in CNGA3 expands the repertoire of the known genetic causes of CRD and phenotypic spectrum of CNGA3 alleles.

Indexed as

HomozygoteMutation, MissenseAllelesAsian PeopleColor Vision DefectsComputational BiologyConsanguinityCyclic Nucleotide-Gated Cation ChannelsElectroretinographyGenetic VariationGenome-Wide Association StudyHaplotypesHEK293 CellsHumansLeber Congenital AmaurosisPakistanCNGA3 protein, humanCyclic Nucleotide-Gated Cation Channels

Identifiers

PMID25052312
PMCPMC4666578
OpenAlexW2072901751

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.