Evidence map›Paper›PMID 25050377›Full record

ArticleBioMed research international2014

A graphic method for identification of novel glioma related genes.

Yu-Fei Gao, Yang Shu, Lei Yang, Yi-Chun He, Li-Peng Li, GuaHua Huang, Hai-Peng Li, Yang Jiang

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Yu-Fei GaoDepartment of Surgery, China-Japan Union Hospital of Jilin University, Changchun 130033, China.
Yang ShuState Key Laboratory of Medical Genomics, Institute of Health Sciences, Shanghai Jiaotong University School of Medicine and Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200025, China.ORCID 0000-0002-8304-1531
Lei YangEndoscopy Center, China-Japan Union Hospital of Jilin University, Changchun 130033, China.
Yi-Chun HeDepartment of Surgery, China-Japan Union Hospital of Jilin University, Changchun 130033, China.
Li-Peng LiDepartment of Surgery, China-Japan Union Hospital of Jilin University, Changchun 130033, China.
GuaHua HuangInstitute of Systems Biology, Shanghai University, Shanghai 200444, China.
Hai-Peng LiCAS-MPG Partner Institute for Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200031, China.
Yang JiangDepartment of Surgery, China-Japan Union Hospital of Jilin University, Changchun 130033, China.ORCID 0000-0002-1901-9778
Union Hospital · CNChinese Academy of Sciences · CNJilin University · CNShanghai Institutes for Biological Sciences · CNShanghai University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glioma, as the most common and lethal intracranial tumor, is a serious disease that causes many deaths every year. Good comprehension of the mechanism underlying this disease is very helpful to design effective treatments. However, up to now, the knowledge of this disease is still limited. It is an important step to understand the mechanism underlying this disease by uncovering its related genes. In this study, a graphic method was proposed to identify novel glioma related genes based on known glioma related genes. A weighted graph was constructed according to the protein-protein interaction information retrieved from STRING and the well-known shortest path algorithm was employed to discover novel genes. The following analysis suggests that some of them are related to the biological process of glioma, proving that our method was effective in identifying novel glioma related genes. We hope that the proposed method would be applied to study other diseases and provide useful information to medical workers, thereby designing effective treatments of different diseases.

Indexed as

AlgorithmsGenes, NeoplasmBrain NeoplasmsGene OntologyGenetic Association StudiesGliomaHumansSignal Transduction

Identifiers

PMID25050377
PMCPMC4094879
OpenAlexW2120254272

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.