Evidence map›Paper›PMID 25049399›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Evolutionary history of tuberculosis shaped by conserved mutations in the PhoPR virulence regulator.

Jesús Gonzalo-Asensio, Wladimir Malaga, Alexandre Pawlik, Catherine Astarie-Dequeker, Charlotte Passemar, Flavie Moreau, Françoise Laval, Mamadou Daffé, Carlos Martin, Roland Brosch and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 100 papers.

0numbers the graph read from it
0cells of the map it votes in
100citing papers in PubMed
12.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

100 citing papers in PubMed, 216 citations in OpenAlex.

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  8. Comparative transcriptomic signatures of virulent and attenuatedFrontiers in cellular and infection microbiology · 2025
    Article
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  15. Review
  16. Will we ever eradicate animal tuberculosis?Irish veterinary journal · 2023
    Article
  17. Article
  18. Review
  19. Genetic Diversity and Population Structure ofPathogens (Basel, Switzerland) · 2023
    Article
  20. Infectious and Inflammatory Pathways to Cough.Annual review of physiology · 2023
    Review

40 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

Jesús Gonzalo-AsensioGrupo de Genética de Micobacterias, Facultad de Medicina, Universidad de Zaragoza, 50009 Zaragoza, Spain;Centro de Investigación Biomédica en Red de Enfermedades Respiratorias, Instituto de Salud Carlos III, 28029 Madrid, Spain;ORCID http://orcid.org/0000-0001-8841-6593
Wladimir MalagaCentre National de la Recherche Scientifique, Institut de Pharmacologie et de Biologie Structurale, 31000 Toulouse, France;Université de Toulouse, Université Paul Sabatier, Institut de Pharmacologie et de Biologie Structurale, 31000 Toulouse, France;
Alexandre PawlikInstitut Pasteur, Unit for Integrated Mycobacterial Pathogenomics, 75015 Paris, France; and.
Catherine Astarie-DequekerCentre National de la Recherche Scientifique, Institut de Pharmacologie et de Biologie Structurale, 31000 Toulouse, France;Université de Toulouse, Université Paul Sabatier, Institut de Pharmacologie et de Biologie Structurale, 31000 Toulouse, France;
Charlotte PassemarCentre National de la Recherche Scientifique, Institut de Pharmacologie et de Biologie Structurale, 31000 Toulouse, France;Université de Toulouse, Université Paul Sabatier, Institut de Pharmacologie et de Biologie Structurale, 31000 Toulouse, France;
Flavie MoreauCentre National de la Recherche Scientifique, Institut de Pharmacologie et de Biologie Structurale, 31000 Toulouse, France;Université de Toulouse, Université Paul Sabatier, Institut de Pharmacologie et de Biologie Structurale, 31000 Toulouse, France;
Françoise LavalCentre National de la Recherche Scientifique, Institut de Pharmacologie et de Biologie Structurale, 31000 Toulouse, France;Université de Toulouse, Université Paul Sabatier, Institut de Pharmacologie et de Biologie Structurale, 31000 Toulouse, France;
Mamadou DafféCentre National de la Recherche Scientifique, Institut de Pharmacologie et de Biologie Structurale, 31000 Toulouse, France;Université de Toulouse, Université Paul Sabatier, Institut de Pharmacologie et de Biologie Structurale, 31000 Toulouse, France;
Carlos MartinGrupo de Genética de Micobacterias, Facultad de Medicina, Universidad de Zaragoza, 50009 Zaragoza, Spain;Centro de Investigación Biomédica en Red de Enfermedades Respiratorias, Instituto de Salud Carlos III, 28029 Madrid, Spain;Servicio de Microbiología, Hospital Universitario Miguel Servet, Instituto de Investigación Sanitaria Aragón, 50009 Zaragoza, Spain.
Roland BroschInstitut Pasteur, Unit for Integrated Mycobacterial Pathogenomics, 75015 Paris, France; and roland.brosch@pasteur.fr Christophe.Guilhot@ipbs.fr.
Christophe GuilhotCentre National de la Recherche Scientifique, Institut de Pharmacologie et de Biologie Structurale, 31000 Toulouse, France;Université de Toulouse, Université Paul Sabatier, Institut de Pharmacologie et de Biologie Structurale, 31000 Toulouse, France; roland.brosch@pasteur.fr Christophe.Guilhot@ipbs.fr.
Université Toulouse III - Paul Sabatier · FRInstitut de Pharmacologie et de Biologie Structurale · FRInstitut Pasteur · FRCentro de Investigación Biomédica en Red de Enfermedades Respiratorias · ESUniversidad de Zaragoza · ESUniversité Fédérale de Toulouse Midi-Pyrénées · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although the bovine tuberculosis (TB) agent, Mycobacterium bovis, may infect humans and cause disease, long-term epidemiological data indicate that humans represent a spill-over host in which infection with M. bovis is not self-maintaining. Indeed, human-to-human transmission of M. bovis strains and other members of the animal lineage of the tubercle bacilli is very rare. Here, we report on three mutations affecting the two-component virulence regulation system PhoP/PhoR (PhoPR) in M. bovis and in the closely linked Mycobacterium africanum lineage 6 (L6) that likely account for this discrepancy. Genetic transfer of these mutations into the human TB agent, Mycobacterium tuberculosis, resulted in down-regulation of the PhoP regulon, with loss of biologically active lipids, reduced secretion of the 6-kDa early antigenic target (ESAT-6), and lower virulence. Remarkably, the deleterious effects of the phoPR mutations were partly compensated by a deletion, specific to the animal-adapted and M. africanum L6 lineages, that restores ESAT-6 secretion by a PhoPR-independent mechanism. Similarly, we also observed that insertion of an IS6110 element upstream of the phoPR locus may completely revert the phoPR-bovis-associated fitness loss, which is the case for an exceptional M. bovis human outbreak strain from Spain. Our findings ultimately explain the long-term epidemiological data, suggesting that M. bovis and related phoPR-mutated strains pose a lower risk for progression to overt human TB, with major impact on the evolutionary history of TB.

Indexed as

Biological EvolutionAllelesAnimalsAntigens, BacterialBacterial ProteinsCattleConserved SequenceGene DeletionHost-Pathogen InteractionsHumansMutagenesis, InsertionalMutationMycobacteriumMycobacterium bovisMycobacterium tuberculosisPhylogenyAntigens, BacterialBacterial ProteinsESAT-6 protein, Mycobacterium tuberculosisPhoP protein, BacteriaPhoR protein, Bacteriaadaptationevolutionphylogenyzoonosis

Identifiers

PMID25049399
PMCPMC4128152
OpenAlexW2016222799

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.