Evidence map›Paper›PMID 25049254›Full record

ArticleAntimicrobial agents and chemotherapy2014

Deletion mutations conferring substrate spectrum extension in the class A β-lactamase.

Junghyun Hwang, Kwang-Hwi Cho, Han Song, Hyojeong Yi, Heenam Stanley Kim

Open access · bronzeAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Exploring the deletion landscape ofbioRxiv : the preprint server for biology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Junghyun HwangDepartment of Medicine, Korea University, Anam-Dong, Seongbuk-Gu, Seoul, South Korea.
Kwang-Hwi ChoSchool of Systems Biomedical Science and Research Center for Integrative Basic Science, Soongsil University, Seoul, South Korea.
Han SongDepartment of Medicine, Korea University, Anam-Dong, Seongbuk-Gu, Seoul, South Korea.
Hyojeong YiDepartment of Medicine, Korea University, Anam-Dong, Seongbuk-Gu, Seoul, South Korea.
Heenam Stanley KimDepartment of Medicine, Korea University, Anam-Dong, Seongbuk-Gu, Seoul, South Korea Department of Biosystems and Biotechnology, Korea University, Anam-Dong, Seongbuk-Gu, Seoul, South Korea hstanleykim@korea.ac.kr.
Korea University · KRSoongsil University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We describe four new deletion mutations in a class A β-lactamase PenA in Burkholderia thailandensis, each conferring an extended substrate spectrum. Single-amino-acid deletions T171del, I173del, and P174del and a two-amino-acid deletion, R165_T167delinsP, occurred in the omega loop, increasing the flexibility of the binding cavity. This rare collection of mutations has significance, allowing exploration of the diverse evolutionary trajectories of β-lactamases and as potential future mutations conferring high-level ceftazidime resistance on isolates from clinical settings, compared with amino acid substitution mutations.

Indexed as

beta-LactamasesBurkholderiaSequence Deletionbeta-Lactamases

Identifiers

PMID25049254
PMCPMC4187959
OpenAlexW2139147280

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.