Evidence map›Paper›PMID 25048375›Full record

ArticleThe American journal of tropical medicine and hygiene2014

Polymorphisms in Plasmodium falciparum chloroquine resistance transporter and multidrug resistance 1 genes: parasite risk factors that affect treatment outcomes for P. falciparum malaria after artemether-lumefantrine and artesunate-amodiaquine.

Meera Venkatesan, Nahla B Gadalla, Kasia Stepniewska, Prabin Dahal, Christian Nsanzabana, Clarissa Moriera, Ric N Price, Andreas Mårtensson, Philip J Rosenthal, Grant Dorsey and 53 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in The American journal of tropical medicine and hygiene, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 197 papers, 9 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
197citing papers in PubMed, 9 pooled it
19.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

197 citing papers in PubMed, 9 syntheses or guidelines pooled it, 298 citations in OpenAlex.

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137 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

63 authors at 20 institutions in 18 countries.

Meera Venkatesan
Nahla B Gadalla
Kasia Stepniewska
Prabin Dahal
Christian Nsanzabana
Clarissa Moriera
Ric N Price
Andreas Mårtensson
Philip J Rosenthal
Grant Dorsey
Colin J Sutherland
Philippe Guérin
Timothy M E Davis
Didier Ménard
Ishag Adam
George Ademowo
Cesar Arze
Frederick N Baliraine
Nicole Berens-Riha
Anders Björkman
Steffen Borrmann
Francesco Checchi
Meghna Desai
Mehul Dhorda
Abdoulaye A Djimdé
Badria B El-Sayed
Teferi Eshetu
Frederick Eyase
Catherine Falade
Jean-François Faucher
Gabrielle Fröberg
Anastasia Grivoyannis
Sally Hamour
Sandrine Houzé
Jacob Johnson
Erasmus Kamugisha
Simon Kariuki
Jean-René Kiechel
Fred Kironde
Poul-Erik Kofoed
Jacques LeBras
Maja Malmberg
Leah Mwai
Billy Ngasala
Francois Nosten
Samuel L Nsobya
Alexis Nzila
Mary Oguike
Sabina Dahlström Otienoburu
Bernhards Ogutu
Jean-Bosco Ouédraogo
Patrice Piola
Lars Rombo
Birgit Schramm
A Fabrice Somé
Julie Thwing
Johan Ursing
Rina P M Wong
Ahmed Zeynudin
Issaka Zongo
Christopher V Plowe
Carol Hopkins Sibley
Asaq Molecular Marker Study Group
University of Oxford · GBUniversity of Washington · USKarolinska Institutet · SEKenya Medical Research Institute · KECenters for Disease Control and Prevention · USUniversity of Maryland, Baltimore · USMakerere University · UGUniversité Paris Cité · FRUniversity of California, San Francisco · USUniversity of Ibadan · NGUniversity of London · GBWellcome Trust · GBCatholic University of Health and Allied Sciences · TZCheikh Anta Diop University · SNDrugs for Neglected Diseases Initiative · CHHospital for Tropical Diseases · GBInstitut Pasteur · FRJimma University · ETLeTourneau University · USLudwig-Maximilians-Universität München · DE

Funding

Microbial Pathogenesis and Host DefenseT32AI060537 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Joanne N. Engel · 2004 to 2026
$6.5M
NIAID NIH HHS T32 AI060537Wellcome Trust 091625
6 · The paper itself

Abstract

Adequate clinical and parasitologic cure by artemisinin combination therapies relies on the artemisinin component and the partner drug. Polymorphisms in the Plasmodium falciparum chloroquine resistance transporter (pfcrt) and P. falciparum multidrug resistance 1 (pfmdr1) genes are associated with decreased sensitivity to amodiaquine and lumefantrine, but effects of these polymorphisms on therapeutic responses to artesunate-amodiaquine (ASAQ) and artemether-lumefantrine (AL) have not been clearly defined. Individual patient data from 31 clinical trials were harmonized and pooled by using standardized methods from the WorldWide Antimalarial Resistance Network. Data for more than 7,000 patients were analyzed to assess relationships between parasite polymorphisms in pfcrt and pfmdr1 and clinically relevant outcomes after treatment with AL or ASAQ. Presence of the pfmdr1 gene N86 (adjusted hazards ratio = 4.74, 95% confidence interval = 2.29 - 9.78, P < 0.001) and increased pfmdr1 copy number (adjusted hazards ratio = 6.52, 95% confidence interval = 2.36-17.97, P < 0.001 : were significant independent risk factors for recrudescence in patients treated with AL. AL and ASAQ exerted opposing selective effects on single-nucleotide polymorphisms in pfcrt and pfmdr1. Monitoring selection and responding to emerging signs of drug resistance are critical tools for preserving efficacy of artemisinin combination therapies; determination of the prevalence of at least pfcrt K76T and pfmdr1 N86Y should now be routine.

Indexed as

Polymorphism, GeneticAmino Acid SubstitutionAmodiaquineAntimalarialsArtemetherArtemisininsATP-Binding Cassette, Sub-Family C ProteinsChildChild, PreschoolChloroquineDatasets as TopicDrug CombinationsDrug ResistanceDrug Therapy, CombinationEthanolaminesFluorenesAmodiaquineamodiaquine, artesunate drug combinationAntimalarialsArtemetherArtemisininsATP-Binding Cassette, Sub-Family C ProteinsChloroquineDrug CombinationsEthanolaminesFluorenesGenetic MarkersLumefantrineMdr1 protein, Plasmodium falciparumMembrane Transport ProteinsPfCRT protein, Plasmodium falciparumProtozoan Proteins

Identifiers

PMID25048375
PMCPMC4183414
OpenAlexW2103439634

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.