Evidence map›Paper›PMID 25043635›Full record

ArticleProtein science : a publication of the Protein Society2014

Probing structurally altered and aggregated states of therapeutically relevant proteins using GroEL coupled to bio-layer interferometry.

Subhashchandra Naik, Ozan S Kumru, Melissa Cullom, Srivalli N Telikepalli, Elizabeth Lindboe, Taylor L Roop, Sangeeta B Joshi, Divya Amin, Phillip Gao, C Russell Middaugh and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Subhashchandra NaikDepartment of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, Kansas, 66160.
Ozan S Kumru
Melissa Cullom
Srivalli N Telikepalli
Elizabeth Lindboe
Taylor L Roop
Sangeeta B Joshi
Divya Amin
Phillip Gao
C Russell Middaugh
David B Volkin
Mark T Fisher
University of Kansas · USUniversity of Kansas Medical Center · US

Funding

TRAFFICKING OF THE PLASMA MEMBRANE CA2+-ATPASE TO RAFTSP20RR017708 · NCRR · UNIVERSITY OF KANSAS LAWRENCE · PI HOLYOAK, TODD · 2002 to 2011
$20.1M
Protein Structure Laboratory P30GM110761 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI HANZLIK, ROBERT P · 2014 to 2018
$5.6M
PHARMACEUTICAL ASPECTS OF BIOTECHNOLOGY TRAININGT32GM008359 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI SIAHAAN, TERUNA J., VOLKIN, DAVID · 1989 to 2018
$5.0M
Protein Structure and FunctionP20GM103420 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI HANZLIK, ROBERT P · 2012 to 2012
$2.0M
CryoEM analysis of Anthrax Toxin Pore ComplexesR01AI090085 · NIAID · UNIVERSITY OF KANSAS MEDICAL CENTER · PI FISHER, MARK T · 2011 to 2013
$948k
NCRR NIH HHS 5P20RR017708-10NCRR NIH HHS P20 RR017708NIAID NIH HHS R01AI090085NIGMS NIH HHS 5-T32-GM008359NIGMS NIH HHS 8P20 GM103420-10NIGMS NIH HHS P20 GM103420NIGMS NIH HHS P30 GM110761
6 · The paper itself

Abstract

The ability of a GroEL-based bio-layer interferometry (BLI) assay to detect structurally altered and/or aggregated species of pharmaceutically relevant proteins is demonstrated. Assay development included optimizing biotinylated-GroEL immobilization to streptavidin biosensors, combined with biophysical and activity measurements showing native and biotinylated GroEL are both stable and active. First, acidic fibroblast growth factor (FGF-1) was incubated under conditions known to promote (40°C) and inhibit (heparin addition) molten globule formation. Heat exposed (40°C) FGF-1 exhibited binding to GroEL-biosensors, which was significantly diminished in the presence of heparin. Second, a polyclonal human IgG solution containing 6-8% non-native dimer showed an increase in higher molecular weight aggregates upon heating by size exclusion chromatography (SEC). The poly IgG solution displayed binding to GroEL-biosensors initially with progressively increased binding upon heating. Enriched preparations of the IgG dimers or monomers showed significant binding to GroEL-biosensors. Finally, a thermally treated IgG1 monoclonal antibody (mAb) solution also demonstrated increased GroEL-biosensor binding, but with different kinetics. The bound complexes could be partially to fully dissociated after ATP addition (i.e., specific GroEL binding) depending on the protein, environmental stress, and the assay's experimental conditions. Transmission electron microscopy (TEM) images of GroEL-mAb complexes, released from the biosensor, also confirmed interaction of bound complexes at the GroEL binding site with heat-stressed mAb. Results indicate that the GroEL-biosensor-BLI method can detect conformationally altered and/or early aggregation states of proteins, and may potentially be useful as a rapid, stability-indicating biosensor assay for monitoring the structural integrity and physical stability of therapeutic protein candidates.

Indexed as

Antibodies, MonoclonalBinding SitesBiosensing TechniquesChaperonin 60Circular DichroismFibroblast Growth Factor 1HumansImmunoglobulin GInterferometryKineticsTemperatureAntibodies, MonoclonalChaperonin 60Fibroblast Growth Factor 1Immunoglobulin Gbio-layer interferometrychaperoninformulationGroELmolten globulemonoclonal antibodyprotein aggregationstability

Identifiers

PMID25043635
PMCPMC4287005
OpenAlexW2159077097

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.