Evidence map›Paper›PMID 25041362›Full record

ArticleJournal of the American Chemical Society2014

Rational design of CXCR4 specific antibodies with elongated CDRs.

Tao Liu, Yan Liu, Ying Wang, Mitchell Hull, Peter G Schultz, Feng Wang

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Rational design of a Kv1.3 channel-blocking antibody as a selective immunosuppressant.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  12. Article
  13. Switch-mediated activation and retargeting of CAR-T cells for B-cell malignancies.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  14. Article
  15. Review
  16. An immunosuppressive antibody-drug conjugate.Journal of the American Chemical Society · 2015
    Article
  17. Functional human antibody CDR fusions as long-acting therapeutic endocrine agonists.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Tao LiuDepartment of Chemistry and the Skaggs Institute for Chemical Biology, The Scripps Research Institute , La Jolla, California 92037, United States.
Yan Liu
Ying Wang
Mitchell Hull
Peter G Schultz
Feng Wang
California Institute for Biomedical Research · USScripps Research Institute · US

Funding

Ribosomal Synthesis of Peptides with Unnatural Building BlocksR01GM097206 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI SCHULTZ, PETER G · 2011 to 2014
$1.4M
NIGMS NIH HHS R01 GM097206
6 · The paper itself

Abstract

The bovine antibody (BLV1H12) which has an ultralong heavy chain complementarity determining region 3 (CDRH3) provides a novel scaffold for antibody engineering. By substituting the extended CDRH3 of BLV1H12 with modified CXCR4 binding peptides that adopt a β-hairpin conformation, we generated antibodies specifically targeting the ligand binding pocket of CXCR4 receptor. These engineered antibodies selectively bind to CXCR4 expressing cells with binding affinities in the low nanomolar range. In addition, they inhibit SDF-1-dependent signal transduction and cell migration in a transwell assay. Finally, we also demonstrate that a similar strategy can be applied to other CDRs and show that a CDRH2-peptide fusion binds CXCR4 with a K(d) of 0.9 nM. This work illustrates the versatility of scaffold-based antibody engineering and could greatly expand the antibody functional repertoire in the future.

Indexed as

Amino Acid SequenceAnimalsAntibodiesAntibody SpecificityCattleCell LineChemokine CXCL12Complementarity Determining RegionsHumansModels, MolecularMolecular Sequence DataPeptidesProtein EngineeringProtein Structure, SecondaryReceptors, CXCR4Recombinant Fusion ProteinsAntibodiesChemokine CXCL12Complementarity Determining RegionsPeptidesReceptors, CXCR4Recombinant Fusion Proteins

Identifiers

PMID25041362
PMCPMC4120998
OpenAlexW2404542855

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.