Evidence map›Paper›PMID 25039491›Full record

ArticleJournal of thrombosis and haemostasis : JTH2014

IKKβ regulates endothelial thrombomodulin in a Klf2-dependent manner.

R Pathak, L Shao, S M Chafekar, W Feng, U Ponnappan, L M Fink, D Zhou, M Hauer-Jensen

Open access · bronzeAbstract read
In one paragraph

Article in Journal of thrombosis and haemostasis : JTH, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Krüppel-like factors and vascular wall homeostasis.Journal of molecular cell biology · 2017
    Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

R Pathak *Division of Radiation Health, Department of Pharmaceutical Sciences, University of Arkansas for Medical Sciences, Little Rock, AR.
L Shao *Division of Radiation Health, Department of Pharmaceutical Sciences, University of Arkansas for Medical Sciences, Little Rock, AR.
S M ChafekarDepartment of Microbiology and Immunology, University of Arkansas for Medical Sciences, Little Rock, AR.
W FengDivision of Radiation Health, Department of Pharmaceutical Sciences, University of Arkansas for Medical Sciences, Little Rock, AR.
U PonnappanDepartment of Microbiology and Immunology, University of Arkansas for Medical Sciences, Little Rock, AR.
L M FinkDesert Research Institute, Las Vegas, NV.
D Zhou *Division of Radiation Health, Department of Pharmaceutical Sciences, University of Arkansas for Medical Sciences, Little Rock, AR.
M Hauer-Jensen *Division of Radiation Health, Department of Pharmaceutical Sciences, University of Arkansas for Medical Sciences, Little Rock, AR.
University of Arkansas for Medical Sciences · USCentral Arkansas Veterans Healthcare System · USDesert Research Institute · US

Funding

Somatostatin analogues as countermeasures against intestinal radiation toxicityU19AI067798 · NIAID · DUKE UNIVERSITY · PI CHAO, NELSON J. · 2005 to 2024
$82.1M
Cancer Therapy-induced Long-term Bone Marrow InjuryR01CA122023 · NCI · UNIV OF ARKANSAS FOR MED SCIS · PI ZHOU, DAOHONG · 2007 to 2018
$3.1M
Endothelial Dysfunction in Intestinal Radiation ToxicityR01CA083719 · NCI · UNIV OF ARKANSAS FOR MED SCIS · PI HAUER-JENSEN, MARTIN · 2000 to 2009
$2.8M
Role of p38 MAPK in HSC Self-Renewal and Radiation-Induced Bone Marrow InjuryR01AI080421 · NIAID · UNIV OF ARKANSAS FOR MED SCIS · PI ZHOU, DAOHONG · 2008 to 2012
$1.8M
Molecular Pathogenesis of Radiation EnteropathyR37CA071382 · NCI · UNIV OF ARKANSAS FOR MED SCIS · PI HAUER-JENSEN, MARTIN · 2008 to 2013
$1.7M
MOLECULAR PATHOGENESIS OF RADIATION ENTEROPATHYR01CA071382 · NCI · UNIVERSITY OF ARKANSAS MED SCIS LTL ROCK · PI HAUER-JENSEN, MARTIN · 1997 to 2005
$1.6M
NCI NIH HHS CA71382NCI NIH HHS R01 CA071382NCI NIH HHS R01 CA083719NCI NIH HHS R01 CA122023NCI NIH HHS R01CA122023NCI NIH HHS R37 CA071382NIAID NIH HHS AI67798NIAID NIH HHS R01 AI080421NIAID NIH HHS U19 AI067798
6 · The paper itself

Abstract

backgroundEndothelial thrombomodulin (TM) is critically involved in anticoagulation, anti-inflammation, cytoprotection and normal fetal development. Tumor necrosis factor alpha (TNFα) suppresses TM expression.

objectiveTNFα has been shown to down-regulate TM partly via activation of nuclear factor kappa B (NF-κB). However, because the TM promoter lacks an NF-κB binding site, the direct involvement of NF-κB has been controversial. We investigated the role of the upstream regulatory serine kinase, inhibitory kappa-B kinase-β (IKKβ), in TM expression and function with or without TNFα treatment.

methodsInhibition of IKKβ was achieved by specific chemical inhibitors, siRNA or shRNA. TM expression was assessed by qRT-PCR, Western blot, flow cytometry, luciferase reporter assay and chromatin immune-precipitation (ChIP) assay. TM function was estimated by generation of activated protein C (APC). NF-κB activation was determined by immunocytochemistry. RESULTS AND

conclusionsIKKβ inhibition increased TM expression and function, and attenuated TNFα-mediated TM down-regulation. In contrast, inhibition of downstream canonical NF-κB protein family members p50 and p65 (RelA) failed to up-regulate TM expression and did not affect IKKβ inhibition-mediated TM over-expression. However, knockdown of cRel and RelB, family members of the canonical and non-canonical NF-κB pathway, respectively, resulted in TM over-expression. IKKβ inhibition caused over-expression, increased promoter activity and enhanced binding of Krüppel-like factor 2 (Klf2) to the TM promoter, which positively regulates TM expression. Finally, knockdown of Klf2 completely attenuated IKKβ inhibition-mediated TM up-regulation. We conclude that IKKβ regulates TM in a Klf2-dependent manner.

Indexed as

Gene Expression RegulationAnticoagulantsAnti-Inflammatory AgentsBinding SitesChromatin ImmunoprecipitationDown-RegulationEndothelium, VascularFlow CytometryHEK293 CellsHumansHuman Umbilical Vein Endothelial CellsI-kappa B KinaseKruppel-Like Transcription FactorsMolecular Sequence DataNF-kappa BPromoter Regions, GeneticAnticoagulantsAnti-Inflammatory AgentsI-kappa B KinaseKLF2 protein, humanKruppel-Like Transcription FactorsNF-kappa BProtein CRNA, Small InterferingThrombomodulinTumor Necrosis Factor-alphaendothelial cellsinflammationNF-kappa βthrombomodulinthrombosis

Identifiers

PMID25039491
PMCPMC4163124
OpenAlexW1982509301

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.