Evidence map›Paper›PMID 25037218›Full record

ArticleThe Journal of biological chemistry2014

A retained secretory signal peptide mediates high density lipoprotein (HDL) assembly and function of haptoglobin-related protein.

John M Harrington, Tuiumkan Nishanova, Savannah Rose Pena, Matthew Hess, Chris L Scelsi, Justin Widener, Stephen L Hajduk

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. GluA1 signal peptide determines the spatial assembly of heteromeric AMPA receptors.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  5. Review
  6. Article
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

John M HarringtonFrom the Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602.
Tuiumkan NishanovaFrom the Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602.
Savannah Rose PenaFrom the Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602.
Matthew HessFrom the Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602.
Chris L ScelsiFrom the Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602.
Justin WidenerFrom the Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602.
Stephen L HajdukFrom the Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602 shajduk@bmb.uga.edu.
University of Georgia · US

Funding

Trypanosome Lysis by Human Haptoglobin Related ProteinR01AI039033 · NIAID · UNIVERSITY OF GEORGIA · PI HAJDUK, STEPHEN L · 1996 to 2014
$3.5M
Lysis of Trypanosomes by Haptoglobin Related ProteinR21AI039033 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI HAJDUK, STEPHEN L · 2001 to 2001
$287k
NIAID NIH HHS AI039033NIAID NIH HHS R01 AI039033NIAID NIH HHS R21 AI039033
6 · The paper itself

Abstract

Haptoglobin-related protein (Hpr) is a component of a minor subspecies of high density lipoproteins (HDL) that function in innate immunity. Here we show that assembly of Hpr into HDL is mediated by its retained N-terminal signal peptide, an unusual feature for a secreted protein and the major difference between Hpr and the soluble acute phase protein haptoglobin (Hp). The 18-amino acid signal peptide is necessary for binding to HDL and interacts directly with the hydrocarbon region of lipids. Utilizing model liposomes, we show that the rate of assembly and steady-state distribution of Hpr in lipid particles is mediated by the physical property of lipid fluidity. Dye release assays reveal that Hpr interacts more rapidly with fluid liposomes. Conversely, steady-state binding assays indicate that more rigid lipid compositions stabilize Hpr association. Lipid association also plays a role in facilitating hemoglobin binding by Hpr. Our data may offer an explanation for the distinct distribution of Hpr among HDL subspecies. Rather than protein-protein interactions mediating localization, direct interaction with phospholipids and sensitivity to lipid fluidity may be sufficient for localization of Hpr and may represent a mechanism of HDL subspeciation.

Indexed as

Protein Sorting SignalsAmino Acid SequenceAnisotropyAntigens, NeoplasmApolipoproteinsBlotting, WesternCell MembraneHaptoglobinsHEK293 CellsHemoglobinsHep G2 CellsHumansLipoproteins, HDLLiposomesMembrane FluidityMicroscopy, FluorescenceAntigens, NeoplasmApolipoproteinsHaptoglobinsHemoglobinsHPR protein, humanLipoproteins, HDLLiposomesPhospholipidsProtein Sorting SignalsApolipoproteinHigh Density Lipoprotein (HDL)Lipid FluidityLipoprotein MetabolismLiposomePhospholipidSignal PeptideTrypanosome Lytic Factor

Identifiers

PMID25037218
PMCPMC4155651
OpenAlexW2089318066

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.