Evidence map›Paper›PMID 25034725›Full record

ArticleBMC genetics2014

Genetic structure of wild boar (Sus scrofa) populations from East Asia based on microsatellite loci analyses.

Sung Kyoung Choi, Ji-Eun Lee, Young-Jun Kim, Mi-Sook Min, Inna Voloshina, Alexander Myslenkov, Jang Geun Oh, Tae-Hun Kim, Nickolay Markov, Ivan Seryodkin and 5 more

Open access · diamondAbstract read
In one paragraph

Article in BMC genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 56 citations in OpenAlex.

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  9. Genetic Population Structure of Wild Boars (Animals : an open access journal from MDPI · 2022
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  18. Molecular evidence ofNew microbes and new infections · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 10 institutions in 5 countries.

Sung Kyoung Choi
Ji-Eun Lee
Young-Jun Kim
Mi-Sook Min
Inna Voloshina
Alexander Myslenkov
Jang Geun Oh
Tae-Hun Kim
Nickolay Markov
Ivan Seryodkin
Naotaka Ishiguro
Li Yu
Ya-Ping Zhang
Hang LeeCollege of Veterinary Medicine, Seoul National University, Seoul, Republic of Korea. hanglee@snu.ac.kr.
Kyung Seok Kim
Seoul National University · KRKologrivsky Nature Reserve · RUFar Eastern Branch of the Russian Academy of Sciences · RUGifu University · JPInstitute of Plant and Animal Ecology · RUKunming Institute of Zoology · CNNational Fisheries Research and Development Institute · KRNational Institute of Ecology · KRRural Development Administration · KRYunnan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWild boar, Sus scrofa, is an extant wild ancestor of the domestic pig as an agro-economically important mammal. Wild boar has a worldwide distribution with its geographic origin in Southeast Asia, but genetic diversity and genetic structure of wild boar in East Asia are poorly understood. To characterize the pattern and amount of genetic variation and population structure of wild boar in East Asia, we genotyped and analyzed microsatellite loci for a total of 238 wild boar specimens from ten locations across six countries in East and Southeast Asia.

resultsOur data indicated that wild boar populations in East Asia are genetically diverse and structured, showing a significant correlation of genetic distance with geographic distance and implying a low level of gene flow at a regional scale. Bayesian-based clustering analysis was indicative of seven inferred genetic clusters in which wild boars in East Asia are geographically structured. The level of genetic diversity was relatively high in wild boars from Southeast Asia, compared with those from Northeast Asia. This gradient pattern of genetic diversity is consistent with an assumed ancestral population of wild boar in Southeast Asia. Genetic evidences from a relationship tree and structure analysis suggest that wild boar in Jeju Island, South Korea have a distinct genetic background from those in mainland Korea.

conclusionsOur results reveal a diverse pattern of genetic diversity and the existence of genetic differentiation among wild boar populations inhabiting East Asia. This study highlights the potential contribution of genetic variation of wild boar to the high genetic diversity of local domestic pigs during domestication in East Asia.

Indexed as

Genetics, PopulationMicrosatellite RepeatsAnimalsAsia, EasternBayes TheoremCluster AnalysisGene FlowGenetic VariationSequence Analysis, DNASus scrofa

Identifiers

PMID25034725
PMCPMC4112609
OpenAlexW2088085741

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.