Evidence map›Paper›PMID 25031287›Full record

SynthesisNeurology2014

Meta-analysis in more than 17,900 cases of ischemic stroke reveals a novel association at 12q24.12.

Laura L Kilarski, Sefanja Achterberg, William J Devan, Matthew Traylor, Rainer Malik, Arne Lindgren, Guillame Pare, Pankaj Sharma, Agniesczka Slowik, Vincent Thijs and 39 more

Abstract readMeta-Analysis
In one paragraph

Synthesis in Neurology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers, 6 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed, 6 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 6 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Pooled it
  6. Guideline
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Genome-Wide Detection of mJournal of molecular neuroscience : MN · 2021
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

49 authors.

Laura L Kilarski
Sefanja Achterberg
William J Devan
Matthew Traylor
Rainer Malik
Arne Lindgren
Guillame Pare
Pankaj Sharma
Agniesczka Slowik
Vincent Thijs
Matthew Walters
Bradford B Worrall
Michele M Sale
Ale Algra
L Jaap Kappelle
Cisca Wijmenga
Bo Norrving
Johanna K Sandling
Lars Rönnblom
An Goris
Andre Franke
Cathie Sudlow
Peter M Rothwell
Christopher Levi
Elizabeth G Holliday
Myriam Fornage
Bruce Psaty
Solveig Gretarsdottir
Unnar Thorsteinsdottir
Sudha Seshadri
Braxton D Mitchell
Steven Kittner
Robert Clarke
Jemma C Hopewell
Joshua C Bis
Giorgio B Boncoraglio
James Meschia
M Arfan Ikram
Bjorn M Hansen
Joan Montaner
Gudmar Thorleifsson
Kari Stefanson
Jonathan Rosand
Paul I W de Bakker
Martin Farrall
Martin Dichgans
Hugh S Markus
Steve Bevan
GARNET Collaborative Research Group, Wellcome Trust Case Control Consortium 2, Australian Stroke Genetic Collaborative, the METASTROKE Consortium, and the International Stroke Genetics Consortium

Funding

UC Davis Alzheimer's Disease Core CenterP30AG010129 · NIA · UNIVERSITY OF CALIFORNIA DAVIS · PI DECARLI, CHARLES · 1991 to 2020
$28.3M
PRECURSORS OF STROKE INCIDENCE AND PROGNOSISR01NS017950 · NINDS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Hugo Javier Aparicio, Jose Rafael Romero · 1985 to 2026
$22.9M
Research BaseP30DK072488 · NIDDK · UNIVERSITY OF MARYLAND BALTIMORE · PI MITCHELL, BRAXTON D, TAYLOR, SIMEON I. · 2005 to 2019
$17.3M
NIA NIH HHS P30 AG010129NIDDK NIH HHS P30 DK072488NINDS NIH HHS R01 NS017950Wellcome Trust 095626
6 · The paper itself

Abstract

objectivesTo perform a genome-wide association study (GWAS) using the Immunochip array in 3,420 cases of ischemic stroke and 6,821 controls, followed by a meta-analysis with data from more than 14,000 additional ischemic stroke cases.

methodsUsing the Immunochip, we genotyped 3,420 ischemic stroke cases and 6,821 controls. After imputation we meta-analyzed the results with imputed GWAS data from 3,548 cases and 5,972 controls recruited from the ischemic stroke WTCCC2 study, and with summary statistics from a further 8,480 cases and 56,032 controls in the METASTROKE consortium. A final in silico "look-up" of 2 single nucleotide polymorphisms in 2,522 cases and 1,899 controls was performed. Associations were also examined in 1,088 cases with intracerebral hemorrhage and 1,102 controls.

resultsIn an overall analysis of 17,970 cases of ischemic stroke and 70,764 controls, we identified a novel association on chromosome 12q24 (rs10744777, odds ratio [OR] 1.10 [1.07-1.13], p = 7.12 × 10(-11)) with ischemic stroke. The association was with all ischemic stroke rather than an individual stroke subtype, with similar effect sizes seen in different stroke subtypes. There was no association with intracerebral hemorrhage (OR 1.03 [0.90-1.17], p = 0.695).

conclusionOur results show, for the first time, a genetic risk locus associated with ischemic stroke as a whole, rather than in a subtype-specific manner. This finding was not associated with intracerebral hemorrhage.

Indexed as

Genetic Predisposition to DiseaseBrain IschemiaCerebral HemorrhageChromosomes, Human, Pair 12Genome-Wide Association StudyGenotypeHumansPolymorphism, Single NucleotideRiskStroke

Identifiers

PMID25031287
PMCPMC4150131

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.