Evidence map›Paper›PMID 25029272›Full record

ArticlePloS one2014

Pax6 regulates the expression of Dkk3 in murine and human cell lines, and altered responses to Wnt signaling are shown in FlpIn-3T3 cells stably expressing either the Pax6 or the Pax6(5a) isoform.

Siri Forsdahl, Yury Kiselev, Rune Hogseth, Janne E Mjelle, Ingvild Mikkola

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. HCE-T cell line lacks cornea-specific differentiation markers compared to primary limbal epithelial cells and differentiated corneal epithelium.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2020
    Article
  6. Article
  7. Article
  8. Wnt Signaling in vascular eye diseases.Progress in retinal and eye research · 2019
    Review
  9. Article
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Siri ForsdahlResearch Group of Pharmacology, Department of Pharmacy, UiT - The Artic University of Norway, Tromsoe, Norway.
Yury KiselevResearch Group of Pharmacology, Department of Pharmacy, UiT - The Artic University of Norway, Tromsoe, Norway; Norwegian Translational Cancer Research Center, Department of Medical Biology, UiT - The Arctic University of Norway, Tromsoe, Norway.
Rune HogsethResearch Group of Pharmacology, Department of Pharmacy, UiT - The Artic University of Norway, Tromsoe, Norway.
Janne E MjelleResearch Group of Pharmacology, Department of Pharmacy, UiT - The Artic University of Norway, Tromsoe, Norway.
Ingvild MikkolaResearch Group of Pharmacology, Department of Pharmacy, UiT - The Artic University of Norway, Tromsoe, Norway.
UiT The Arctic University of Norway · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pax6 is a transcription factor important for early embryo development. It is expressed in several cancer cell lines and tumors. In glioblastoma, PAX6 has been shown to function as a tumor suppressor. Dickkopf 3 (Dkk3) is well established as a tumor suppressor in several tumor types, but not much is known about the regulation of its expression. We have previously found that Pax6 and Pax6(5a) increase the expression of the Dkk3 gene in two stably transfected mouse fibroblast cell lines. In this study the molecular mechanism behind this regulation is looked at. Western blot and reverse transcriptase quantitative PCR (RT-qPCR) confirmed higher level of Dkk3 expression in both Pax6 and Pax6(5a) expressing cell lines compared to the control cell line. By the use of bioinformatics and electrophoretic mobility shift assay (EMSA) we have mapped a functional Pax6 binding site in the mouse Dkk3 promoter. The minimal Dkk3 promoter fragment required for transcriptional activation by Pax6 and Pax6(5a) was a 200 bp region just upstream of the transcriptional start site. Mutation of the evolutionary conserved binding site in this region abrogated transcriptional activation and binding of Pax6/Pax6(5a) to the mouse Dkk3 promoter. Since the identified Pax6 binding site in this promoter is conserved, RT-qPCR and Western blot were used to look for regulation of Dkk3/REIC expression in human cell lines. Six of eight cell lines tested showed changes in Dkk3/REIC expression after PAX6 siRNA knockdown. Interestingly, we observed that the Pax6/Pax6(5a) expressing mouse fibroblast cell lines were less responsive to canonical Wnt pathway stimulation than the control cell line when TOP/FOP activity and the levels of active β-catenin and GSK3-β Ser9 phosphorylation were measured after LiCl stimulation.

Indexed as

3T3 CellsAdaptor Proteins, Signal TransducingAnimalsBase Sequencebeta CateninBlotting, WesternChemokinesEye ProteinsGene Expression RegulationGene Knockdown TechniquesGlycogen Synthase Kinase 3Glycogen Synthase Kinase 3 betaHomeodomain ProteinsHumansIntercellular Signaling Peptides and ProteinsMiceAdaptor Proteins, Signal Transducingbeta CateninChemokinesDKK3 protein, humanEye ProteinsGlycogen Synthase Kinase 3Glycogen Synthase Kinase 3 betaHomeodomain ProteinsIntercellular Signaling Peptides and ProteinsPaired Box Transcription FactorsPAX6 protein, humanPax6 protein, mousePAX6 Transcription FactorProtein IsoformsRepressor Proteins

Identifiers

PMID25029272
PMCPMC4100929
OpenAlexW2105792337

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.