Evidence map›Paper›PMID 25025039›Full record

ArticleBioMed research international2014

Genetic diagnosis of Charcot-Marie-Tooth disease in a population by next-generation sequencing.

Helle Høyer, Geir J Braathen, Øyvind L Busk, Øystein L Holla, Marit Svendsen, Hilde T Hilmarsen, Linda Strand, Camilla F Skjelbred, Michael B Russell

RetractedErratum issuedOpen access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 69 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Integrated genome and transcriptome analyses reveal the mechanism of genome instability in ataxia with oculomotor apraxia 2.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  10. Review
  11. Article
  12. A new mutation in DNM2 gene in a large Italian family.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2021
    Article
  13. Article
  14. Article
  15. Impaired Mitochondrial Mobility in Charcot-Marie-Tooth Disease.Frontiers in cell and developmental biology · 2021
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Helle HøyerSection of Medical Genetics, Department of Laboratory Medicine, Telemark Hospital, 3710 Skien, Norway ; Head and Neck Research Group, Research Centre, Akershus University Hospital, Lørenskog, Norway ; Campus Akershus University Hospital, University of Oslo, Nordbyhagen, Norway.
Geir J BraathenSection of Medical Genetics, Department of Laboratory Medicine, Telemark Hospital, 3710 Skien, Norway ; Head and Neck Research Group, Research Centre, Akershus University Hospital, Lørenskog, Norway ; Campus Akershus University Hospital, University of Oslo, Nordbyhagen, Norway.
Øyvind L BuskSection of Medical Genetics, Department of Laboratory Medicine, Telemark Hospital, 3710 Skien, Norway.
Øystein L HollaSection of Medical Genetics, Department of Laboratory Medicine, Telemark Hospital, 3710 Skien, Norway.
Marit SvendsenSection of Medical Genetics, Department of Laboratory Medicine, Telemark Hospital, 3710 Skien, Norway.
Hilde T HilmarsenSection of Medical Genetics, Department of Laboratory Medicine, Telemark Hospital, 3710 Skien, Norway.
Linda StrandSection of Medical Genetics, Department of Laboratory Medicine, Telemark Hospital, 3710 Skien, Norway.
Camilla F SkjelbredSection of Medical Genetics, Department of Laboratory Medicine, Telemark Hospital, 3710 Skien, Norway.
Michael B RussellHead and Neck Research Group, Research Centre, Akershus University Hospital, Lørenskog, Norway ; Campus Akershus University Hospital, University of Oslo, Nordbyhagen, Norway.
Telemark Hospital · NOAkershus University Hospital · NOUniversity of Oslo · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Charcot-Marie-Tooth (CMT) disease is the most prevalent inherited neuropathy. Today more than 40 CMT genes have been identified. Diagnosing heterogeneous diseases by conventional Sanger sequencing is time consuming and expensive. Thus, more efficient and less costly methods are needed in clinical diagnostics. We included a population based sample of 81 CMT families. Gene mutations had previously been identified in 22 families; the remaining 59 families were analysed by next-generation sequencing. Thirty-two CMT genes and 19 genes causing other inherited neuropathies were included in a custom panel. Variants were classified into five pathogenicity classes by genotype-phenotype correlations and bioinformatics tools. Gene mutations, classified certainly or likely pathogenic, were identified in 37 (46%) of the 81 families. Point mutations in known CMT genes were identified in 21 families (26%), whereas four families (5%) had point mutations in other neuropathy genes, ARHGEF10, POLG, SETX, and SOD1. Eleven families (14%) carried the PMP22 duplication and one family carried a MPZ duplication (1%). Most mutations were identified not only in known CMT genes but also in other neuropathy genes, emphasising that genetic analysis should not be restricted to CMT genes only. Next-generation sequencing is a cost-effective tool in diagnosis of CMT improving diagnostic precision and time efficiency.

Indexed as

Genetics, PopulationCharcot-Marie-Tooth DiseaseGenetic Association StudiesGenome, HumanHigh-Throughput Nucleotide SequencingHumansMutationPolymorphism, Single Nucleotide

Identifiers

PMID25025039
PMCPMC4082881
OpenAlexW2171054794

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.