Evidence map›Paper›PMID 25022856›Full record

ArticleJournal of bacteriology2014

Coregulated genes link sulfide:quinone oxidoreductase and arsenic metabolism in Synechocystis sp. strain PCC6803.

Csaba I Nagy, Imre Vass, Gábor Rákhely, István Zoltán Vass, András Tóth, Agnes Duzs, Loredana Peca, Jerzy Kruk, Péter B Kós

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.4field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 39 citations in OpenAlex.

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  11. Transcriptomic Analysis of TwoFrontiers in microbiology · 2019
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  12. Photosynthetic Versatility in the Genome ofFrontiers in microbiology · 2016
    Article
  13. Article
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  15. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Csaba I NagyInstitute of Plant Biology, Biological Research Centre of the Hungarian Academy of Sciences, Szeged, Hungary.
Imre VassInstitute of Plant Biology, Biological Research Centre of the Hungarian Academy of Sciences, Szeged, Hungary.
Gábor RákhelyDepartment of Biotechnology, Faculty of Science and Informatics, University of Szeged, Szeged, Hungary Institute of Biophysics, Biological Research Centre of the Hungarian Academy of Sciences, Szeged, Hungary.
István Zoltán VassInstitute of Plant Biology, Biological Research Centre of the Hungarian Academy of Sciences, Szeged, Hungary.
András TóthDepartment of Biotechnology, Faculty of Science and Informatics, University of Szeged, Szeged, Hungary Institute of Biophysics, Biological Research Centre of the Hungarian Academy of Sciences, Szeged, Hungary.
Agnes DuzsInstitute of Biophysics, Biological Research Centre of the Hungarian Academy of Sciences, Szeged, Hungary.
Loredana PecaInstitute of Plant Biology, Biological Research Centre of the Hungarian Academy of Sciences, Szeged, Hungary.
Jerzy KrukDepartment of Plant Physiology and Biochemistry, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Krakow, Poland.
Péter B KósInstitute of Plant Biology, Biological Research Centre of the Hungarian Academy of Sciences, Szeged, Hungary Department of Biotechnology, Faculty of Science and Informatics, University of Szeged, Szeged, Hungary kp@brc.hu.ORCID http://orcid.org/0000-0001-7443-9671
HUN-REN Szegedi Biológiai Kutatóközpont · HUInstitute of Plant Biology · HUHungarian Academy of Sciences · HUInstitute of Biophysics · HUJagiellonian University · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although the biogeochemistry of the two environmentally hazardous compounds arsenic and sulfide has been extensively investigated, the biological interference of these two toxic but potentially energy-rich compounds has only been hypothesized and indirectly proven. Here we provide direct evidence for the first time that in the photosynthetic model organism Synechocystis sp. strain PCC6803 the two metabolic pathways are linked by coregulated genes that are involved in arsenic transport, sulfide oxidation, and probably in sulfide-based alternative photosynthesis. Although Synechocystis sp. strain PCC6803 is an obligate photoautotrophic cyanobacterium that grows via oxygenic photosynthesis, we discovered that specific genes are activated in the presence of sulfide or arsenite to exploit the energy potentials of these chemicals. These genes form an operon that we termed suoRSCT, located on a transposable element of type IS4 on the plasmid pSYSM of the cyanobacterium. suoS (sll5036) encodes a light-dependent, type I sulfide:quinone oxidoreductase. The suoR (sll5035) gene downstream of suoS encodes a regulatory protein that belongs to the ArsR-type repressors that are normally involved in arsenic resistance. We found that this repressor has dual specificity, resulting in 200-fold induction of the operon upon either arsenite or sulfide exposure. The suoT gene encodes a transmembrane protein similar to chromate transporters but in fact functioning as an arsenite importer at permissive concentrations. We propose that the proteins encoded by the suoRSCT operon might have played an important role under anaerobic, reducing conditions on primordial Earth and that the operon was acquired by the cyanobacterium via horizontal gene transfer.

Indexed as

Gene Expression Regulation, BacterialArsenicBacterial ProteinsGene Expression Regulation, EnzymologicQuinone ReductasesQuinonesSulfidesSynechocystisArsenicBacterial ProteinsQuinone ReductasesQuinonessulfide quinone reductaseSulfides

Identifiers

PMID25022856
PMCPMC4187677
OpenAlexW2111255903

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.