Evidence map›Paper›PMID 25022240›Full record

ReviewCurrent opinion in microbiology2014

Noncoding RNAs as emerging regulators of Plasmodium falciparum virulence gene expression.

Shruthi S Vembar, Artur Scherf, T Nicolai Siegel

Open access · hybridAbstract readReview
In one paragraph

Review in Current opinion in microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
7.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
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  3. Review
  4. The global transcriptome ofMicrobiology spectrum · 2023
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  7. Article
  8. Article
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  13. Analysis of Long Non-Coding RNA inFrontiers in cellular and infection microbiology · 2020
    Article
  14. Review
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Shruthi S VembarBiology of Host-Parasite Interactions Unit, Institut Pasteur, Paris, France; CNRS URA2581, Paris, France.
Artur ScherfBiology of Host-Parasite Interactions Unit, Institut Pasteur, Paris, France; CNRS URA2581, Paris, France.
T Nicolai SiegelResearch Center for Infectious Diseases, University of Wuerzburg, Josef-Schneider-Str. 2/Bau D15, 97080 Wuerzburg, Germany. Electronic address: nicolai.siegel@uni-wuerzburg.de.
Centre National de la Recherche Scientifique · FRInstitut Pasteur · FRUniversity of Würzburg · DE

Funding

European Research Council 250320
6 · The paper itself

Abstract

The eukaryotic unicellular pathogen Plasmodium falciparum tightly regulates gene expression, both during development and in adaptation to dynamic host environments. This regulation is evident in the mutually exclusive expression of members of clonally variant virulence multigene families. While epigenetic regulators have been selectively identified at active or repressed virulence genes, their specific recruitment remains a mystery. In recent years, noncoding RNAs (ncRNAs) have emerged as lynchpins of eukaryotic gene regulation; by binding to epigenetic regulators, they provide target specificity to otherwise non-specific enzyme complexes. Not surprisingly, there is great interest in understanding the role of ncRNA in P. falciparum, in particular, their contribution to the mutually exclusive expression of virulence genes. The current repertoire of P. falciparum ncRNAs includes, but is not limited to, subtelomeric ncRNAs, virulence gene-associated ncRNAs and natural antisense RNA transcripts. Continued improvement in high-throughput sequencing methods is sure to expand this repertoire. Here, we summarize recent advances in P. falciparum ncRNA biology, with an emphasis on ncRNA-mediated epigenetic modes of gene regulation.

Indexed as

Gene Expression RegulationAdaptation, PhysiologicalEpigenesis, GeneticPlasmodium falciparumRNA, UntranslatedVirulence FactorsRNA, UntranslatedVirulence Factors

Identifiers

PMID25022240
PMCPMC4157322
OpenAlexW2074875016

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.