Evidence map›Paper›PMID 25020069›Full record

ArticleIEEE transactions on medical imaging2014

A generic approach to pathological lung segmentation.

Awais Mansoor, Ulas Bagci, Ziyue Xu, Brent Foster, Kenneth N Olivier, Jason M Elinoff, Anthony F Suffredini, Jayaram K Udupa, Daniel J Mollura

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in IEEE transactions on medical imaging, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
12.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 167 citations in OpenAlex.

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  9. Lung Nodule Segmentation and Recognition Algorithm Based on Multiposition U-Net.Computational and mathematical methods in medicine · 2022
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  10. Measuring pulmonary function in COPD using quantitative chest computed tomography analysis.European respiratory review : an official journal of the European Respiratory Society · 2021
    Review
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  14. Capsules for biomedical image segmentation.Medical image analysis · 2021
    Article
  15. Article
  16. Article
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  18. Article
  19. Article
  20. Unveiling COVID-19 from CHEST X-Ray with Deep Learning: A Hurdles Race with Small Data.International journal of environmental research and public health · 2020
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Awais Mansoor
Ulas Bagci
Ziyue Xu
Brent Foster
Kenneth N Olivier
Jason M Elinoff
Anthony F Suffredini
Jayaram K Udupa
Daniel J Mollura
National Institutes of Health · USUniversity of Pennsylvania · US

Funding

Bronchiectasis and chronic airway infectionZIAHL006200 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI FENNELLY, KEVIN · 2015 to 2025
$25.1M
Computer-Aided Detection for Infectious Disease ImagingZIACL090018 · CLC · CLINICAL CENTER · PI MOLLURA, DANIEL · 2010 to 2018
$0k
Intramural NIH HHS ZIA CL090018
6 · The paper itself

Abstract

In this study, we propose a novel pathological lung segmentation method that takes into account neighbor prior constraints and a novel pathology recognition system. Our proposed framework has two stages; during stage one, we adapted the fuzzy connectedness (FC) image segmentation algorithm to perform initial lung parenchyma extraction. In parallel, we estimate the lung volume using rib-cage information without explicitly delineating lungs. This rudimentary, but intelligent lung volume estimation system allows comparison of volume differences between rib cage and FC based lung volume measurements. Significant volume difference indicates the presence of pathology, which invokes the second stage of the proposed framework for the refinement of segmented lung. In stage two, texture-based features are utilized to detect abnormal imaging patterns (consolidations, ground glass, interstitial thickening, tree-inbud, honeycombing, nodules, and micro-nodules) that might have been missed during the first stage of the algorithm. This refinement stage is further completed by a novel neighboring anatomy-guided segmentation approach to include abnormalities with weak textures, and pleura regions. We evaluated the accuracy and efficiency of the proposed method on more than 400 CT scans with the presence of a wide spectrum of abnormalities. To our best of knowledge, this is the first study to evaluate all abnormal imaging patterns in a single segmentation framework. The quantitative results show that our pathological lung segmentation method improves on current standards because of its high sensitivity and specificity and may have considerable potential to enhance the performance of routine clinical tasks.

Indexed as

AdultAgedAlgorithmsDatabases, FactualFemaleHumansImage Processing, Computer-AssistedLungMaleMiddle AgedPattern Recognition, AutomatedTomography, X-Ray ComputedYoung Adult

Identifiers

PMID25020069
PMCPMC5542015
OpenAlexW1995567168

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.