Evidence map›Paper›PMID 25018622›Full record

ArticleMolecular vision2014

Comparison of effect of gamma ray irradiation on wild-type and N-terminal mutants of αA-crystallin.

Srinivasagan Ramkumar, Noriko Fujii, Norihiko Fujii, Bency Thankappan, Hiroaki Sakaue, Kim Ingu, Kalimuthusamy Natarajaseenivasan, Kumarasamy Anbarasu

Open access · greenAbstract readComparative Study
In one paragraph

Article in Molecular vision, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Srinivasagan RamkumarDepartment of Marine Biotechnology, Bharathidasan University, Tiruchirappalli, Tamil Nadu, India.
Noriko FujiiResearch Reactor Institute, Kyoto University, Kumatori-cho, Sennan-gun, Osaka, Japan.
Norihiko FujiiResearch Reactor Institute, Kyoto University, Kumatori-cho, Sennan-gun, Osaka, Japan ; Teikyo University, Japan.
Bency ThankappanDepartment of Marine Biotechnology, Bharathidasan University, Tiruchirappalli, Tamil Nadu, India.
Hiroaki SakaueResearch Reactor Institute, Kyoto University, Kumatori-cho, Sennan-gun, Osaka, Japan.
Kim InguResearch Reactor Institute, Kyoto University, Kumatori-cho, Sennan-gun, Osaka, Japan.
Kalimuthusamy NatarajaseenivasanDepartment of Microbiology, Bharathidasan University, Tiruchirappalli, Tamil Nadu, India.
Kumarasamy AnbarasuDepartment of Marine Biotechnology, Bharathidasan University, Tiruchirappalli, Tamil Nadu, India.
Bharathidasan University · INKyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeTo study the comparative structural and functional changes between wild-type (wt) and N-terminal congenital cataract causing αA-crystallin mutants (R12C, R21L, R49C, and R54C) upon exposure to different dosages of gamma rays.

methodsAlpha A crystallin N-terminal mutants were created with the site-directed mutagenesis method. The recombinantly overexpressed and purified wt and mutant proteins were used for further studies. A (60)Co source was used to generate gamma rays to irradiate wild and mutant proteins at dosages of 0.5, 1.0, and 2.0 kGy. The biophysical property of the gamma irradiated (GI) and non-gamma irradiated (NGI) αA-crystallin wt and N-terminal mutants were determined. Oligomeric size was determined by size exclusion high-performance liquid chromatography (HPLC), the secondary structure with circular dichroism (CD) spectrometry, conformation of proteins with surface hydrophobicity, and the functional characterization were determined regarding chaperone activity using the alcohol dehydrogenase (ADH) aggregation assay.

resultsαA-crystallin N-terminal mutants formed high molecular weight (HMW) cross-linked products as well as aggregates when exposed to GI compared to the NGI wt counterparts. Furthermore, all mutants exhibited changed β-sheet and random coil structure. The GI mutants demonstrated decreased surface hydrophobicity when compared to αA-crystallin wt at 0, 1.0, and 1.5 kGy; however, at 2.0 kGy a drastic increase in hydrophobicity was observed only in the mutant R54C, not the wt. In contrast, chaperone activity toward ADH was gradually elevated at the minimum level in all GI mutants, and significant elevation was observed in the R12C mutant.

conclusionsOur findings suggest that the N-terminal mutants of αA-crystallin are structurally and functionally more sensitive to GI when compared to their NGI counterparts and wt. Protein oxidation as a result of gamma irradiation drives the protein to cross-link and aggregate culminating in cataract formation.

Indexed as

Gamma Raysalpha-Crystallin A ChainBase SequenceChromatography, GelChromatography, High Pressure LiquidCircular DichroismCross-Linking ReagentsDensitometryHumansHydrophobic and Hydrophilic InteractionsMolecular Sequence DataMutant ProteinsProtein Structure, QuaternaryProtein Structure, SecondaryPulse RadiolysisReproducibility of Resultsalpha-Crystallin A ChainCross-Linking ReagentsMutant Proteins

Identifiers

PMID25018622
PMCPMC4087120
OpenAlexW1515080323

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.