ArticleApplied and environmental microbiology2014
Influence of Populus genotype on gene expression by the wood decay fungus Phanerochaete chrysosporium.
Article in Applied and environmental microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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Who cites it
20 citing papers in PubMed, 33 citations in OpenAlex.
- Multimodal Analysis and Heterologous Expression Strategies Reveal the Crucial Role of the Lac2 Gene fromJournal of fungi (Basel, Switzerland) · 2026Article
- Transcriptome response of the white-rot fungus Trametes versicolor to hybrid poplar exhibiting unique lignin chemistry.Fungal biology and biotechnology · 2025Article
- Elucidating Thermothielavioides terrestris secretome changes for improved saccharification of mild steam-pretreated spruce.Biotechnology for biofuels and bioproducts · 2024Article
- Retracted and Republished from: "Substrate-Specific Differential Gene Expression and RNA Editing in the Brown Rot FungusApplied and environmental microbiology · 2021Article
- A Multiomic Approach to Understand HowJournal of fungi (Basel, Switzerland) · 2021Article
- Hallmarks of Basidiomycete Soft- and White-Rot in Wood-Decay -Omics Data of TwoMicroorganisms · 2021Article
- Wood-water relationships and their role for wood susceptibility to fungal decay.Applied microbiology and biotechnology · 2020Review
- Evolution of substrate-specific gene expression and RNA editing in brown rot wood-decaying fungi.The ISME journal · 2019Article
- Genome and secretome of Chondrostereum purpureum correspond to saprotrophic and phytopathogenic life styles.PloS one · 2019Article
- Substrate-Specific Differential Gene Expression and RNA Editing in the Brown Rot Fungus Fomitopsis pinicola.Applied and environmental microbiology · 2018Article
- Caldicellulosiruptor saccharolyticus transcriptomes reveal consequences of chemical pretreatment and genetic modification of lignocellulose.Microbial biotechnology · 2017Article
- Gene expression metadata analysis reveals molecular mechanisms employed by Phanerochaete chrysosporium during lignin degradation and detoxification of plant extractives.Current genetics · 2017Article
- The integrative omics of white-rot fungus Pycnoporus coccineus reveals co-regulated CAZymes for orchestrated lignocellulose breakdown.PloS one · 2017Article
- Metadata Analysis ofInternational journal of biological sciences · 2017Article
- Regulation of the fungal secretome.Current genetics · 2016Review
- Gene Expression Patterns of Wood Decay Fungi Postia placenta and Phanerochaete chrysosporium Are Influenced by Wood Substrate Composition during Degradation.Applied and environmental microbiology · 2016Article
- Time-scale dynamics of proteome and transcriptome of the white-rot fungus Phlebia radiata: growth on spruce wood and decay effect on lignocellulose.Biotechnology for biofuels · 2016Article
- A secretomic view of woody and nonwoody lignocellulose degradation by Pleurotus ostreatus.Biotechnology for biofuels · 2016Article
- Regulation of Gene Expression during the Onset of Ligninolytic Oxidation by Phanerochaete chrysosporium on Spruce Wood.Applied and environmental microbiology · 2015Article
- Enhanced degradation of softwood versus hardwood by the white-rot fungus Pycnoporus coccineus.Biotechnology for biofuels · 2015Article
Corrections and comments
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Authors and funding
12 authors at 5 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
We examined gene expression patterns in the lignin-degrading fungus Phanerochaete chrysosporium when it colonizes hybrid poplar (Populus alba × tremula) and syringyl (S)-rich transgenic derivatives. A combination of microarrays and liquid chromatography-tandem mass spectrometry (LC-MS/MS) allowed detection of a total of 9,959 transcripts and 793 proteins. Comparisons of P. chrysosporium transcript abundance in medium containing poplar or glucose as a sole carbon source showed 113 regulated genes, 11 of which were significantly higher (>2-fold, P < 0.05) in transgenic line 64 relative to the parental line. Possibly related to the very large amounts of syringyl (S) units in this transgenic tree (94 mol% S), several oxidoreductases were among the upregulated genes. Peptides corresponding to a total of 18 oxidoreductases were identified in medium consisting of biomass from line 64 or 82 (85 mol% S) but not in the parental clone (65 mol% S). These results demonstrate that P. chrysosporium gene expression patterns are substantially influenced by lignin composition.
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