Evidence map›Paper›PMID 25014207›Full record

ArticlePloS one2014

Liposome reconstitution and modulation of recombinant prenylated human Rac1 by GEFs, GDI1 and Pak1.

Si-Cai Zhang, Lothar Gremer, Henrike Heise, Petra Janning, Aliaksei Shymanets, Ion C Cirstea, Eberhard Krause, Bernd Nürnberg, Mohammad Reza Ahmadian

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. The Pseudo-Natural Product Rhonin Targets RHOGDI.Angewandte Chemie (International ed. in English) · 2022
    Article
  3. Review
  4. New mechanistic insights into the RAS-SIN1 interaction at the membrane.Frontiers in cell and developmental biology · 2022
    Article
  5. Electrostatic Forces Mediate the Specificity of RHO GTPase-GDI Interactions.International journal of molecular sciences · 2021
    Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Si-Cai ZhangInstitute of Biochemistry and Molecular Biology II, Medical Faculty of the Heinrich-Heine University, Düsseldorf, Germany.
Lothar GremerInstitute of Biochemistry and Molecular Biology II, Medical Faculty of the Heinrich-Heine University, Düsseldorf, Germany; Institute of Physical Biology, Heinrich-Heine University, Düsseldorf, Germany; Institute of Complex Systems, ICS-6, Research Center Jülich GmbH, Jülich, Germany.
Henrike HeiseInstitute of Physical Biology, Heinrich-Heine University, Düsseldorf, Germany; Institute of Complex Systems, ICS-6, Research Center Jülich GmbH, Jülich, Germany.
Petra JanningDepartment of Chemical Biology, Max-Planck Institute of Molecular Physiology, Dortmund, Germany.
Aliaksei ShymanetsInstitute of Experimental and Clinical Pharmacology and Toxicology, Tübingen Medical School, Tübingen, Germany.
Ion C CirsteaInstitute of Biochemistry and Molecular Biology II, Medical Faculty of the Heinrich-Heine University, Düsseldorf, Germany; Leibniz Institute for Age Research, Jena, Germany.
Eberhard KrauseLaboratory of Mass Spectrometry, Leibniz Institute of Molecular Pharmacology, Berlin, Germany.
Bernd NürnbergInstitute of Experimental and Clinical Pharmacology and Toxicology, Tübingen Medical School, Tübingen, Germany.
Mohammad Reza AhmadianInstitute of Biochemistry and Molecular Biology II, Medical Faculty of the Heinrich-Heine University, Düsseldorf, Germany.
Heinrich Heine University Düsseldorf · DEForschungszentrum Jülich · DEUniversity of Tübingen · DELeibniz Association · DEMax Planck Institute of Molecular Physiology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Small Rho GTPases are well known to regulate a variety of cellular processes by acting as molecular switches. The regulatory function of Rho GTPases is critically dependent on their posttranslational modification at the carboxyl terminus by isoprenylation and association with proper cellular membranes. Despite numerous studies, the mechanisms of recycling and functional integration of Rho GTPases at the biological membranes are largely unclear. In this study, prenylated human Rac1, a prominent member of the Rho family, was purified in large amount from baculovirus-infected Spodoptera frugiperda insect cells using a systematic detergent screening. In contrast to non-prenylated human Rac1 purified from Escherichia coli, prenylated Rac1 from insect cells was able to associate with synthetic liposomes and to bind Rho-specific guanine nucleotide dissociation inhibitor 1 (GDI1). Subsequent liposome reconstitution experiments revealed that GDI1 efficiently extracts Rac1 from liposomes preferentially in the inactive GDP-bound state. The extraction was prevented when Rac1 was activated to its GTP-bound state by Rac-specific guanine nucleotide exchange factors (GEFs), such as Vav2, Dbl, Tiam1, P-Rex1 and TrioN, and bound by the downstream effector Pak1. We found that dissociation of Rac1-GDP from its complex with GDI1 strongly correlated with two distinct activities of especially Dbl and Tiam1, including liposome association and the GDP/GTP exchange. Taken together, our results provided first detailed insights into the advantages of the in vitro liposome-based reconstitution system to study both the integration of the signal transducing protein complexes and the mechanisms of regulation and signaling of small GTPases at biological membranes.

Indexed as

Protein Processing, Post-TranslationalAnimalsBaculoviridaeEscherichia coliGene ExpressionGuanine Nucleotide Dissociation InhibitorsGuanine Nucleotide Exchange FactorsHumansLiposomesModels, Biologicalp21-Activated KinasesProtein Prenylationrac1 GTP-Binding ProteinRecombinant ProteinsSpodopteraGDP dissociation inhibitor 1Guanine Nucleotide Dissociation InhibitorsGuanine Nucleotide Exchange FactorsLiposomesp21-Activated KinasesPAK1 protein, humanrac1 GTP-Binding ProteinRAC1 protein, humanRecombinant Proteins

Identifiers

PMID25014207
PMCPMC4094549
OpenAlexW2130955533

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.