Evidence map›Paper›PMID 25012905›Full record

ArticleThe ISME journal2015

Early colonizing Escherichia coli elicits remodeling of rat colonic epithelium shifting toward a new homeostatic state.

Julie Tomas, Julie Reygner, Camille Mayeur, Robert Ducroc, Stephan Bouet, Chantal Bridonneau, Jean-Baptiste Cavin, Muriel Thomas, Philippe Langella, Claire Cherbuy

Open access · bronzeAbstract read
In one paragraph

Article in The ISME journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 45 citations in OpenAlex.

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  16. Frontiers in immunology · 2018
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  17. Review
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  19. Fecal Microbiota Transplantation, CommensalFrontiers in microbiology · 2017
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Julie Tomas1] INRA, UMR 1319 MICALIS, F-78350, Jouy-en-Josas, France [2] AgroParisTech, UMR 1319 MICALIS, F-78350, Jouy-en-Josas, France [3] Commensal and Probiotics-Host Interactions Laboratory, INRA, UMR 1319 MICALIS, F-78350, Jouy-en-Josas, France.
Julie Reygner1] PERITOX, EA 4285 UMI 01 INERIS, UFR of Medecine-UPJV, Amiens, France [2] EGEAL team, UPSP 2007-05-137, Institut Polytechnique La Salle Beauvais, Beauvais, France.
Camille Mayeur1] INRA, UMR 1319 MICALIS, F-78350, Jouy-en-Josas, France [2] AgroParisTech, UMR 1319 MICALIS, F-78350, Jouy-en-Josas, France [3] Commensal and Probiotics-Host Interactions Laboratory, INRA, UMR 1319 MICALIS, F-78350, Jouy-en-Josas, France.
Robert DucrocInserm UMRS1149, UFR de Médecine Paris 7, Université Paris Diderot, Sorbonne Paris Cité, Paris, France.
Stephan Bouet1] INRA, UMR 1313, Animal Genetics and Integrative Biology, F-78350, Jouy-en-Josas, France [2] Laboratory of Radiobiology and Genomics Studies, CEA, DSV, IRCM, SREIT, F-78350, Jouy-en-Josas, France [3] AgroParisTech, UMR 1313, Animal Genetics and Integrative Biology, F-78350, Jouy-en-Josas, France.
Chantal Bridonneau1] INRA, UMR 1319 MICALIS, F-78350, Jouy-en-Josas, France [2] AgroParisTech, UMR 1319 MICALIS, F-78350, Jouy-en-Josas, France [3] Commensal and Probiotics-Host Interactions Laboratory, INRA, UMR 1319 MICALIS, F-78350, Jouy-en-Josas, France.
Jean-Baptiste CavinInserm UMRS1149, UFR de Médecine Paris 7, Université Paris Diderot, Sorbonne Paris Cité, Paris, France.
Muriel Thomas1] INRA, UMR 1319 MICALIS, F-78350, Jouy-en-Josas, France [2] AgroParisTech, UMR 1319 MICALIS, F-78350, Jouy-en-Josas, France [3] Commensal and Probiotics-Host Interactions Laboratory, INRA, UMR 1319 MICALIS, F-78350, Jouy-en-Josas, France.
Philippe Langella1] INRA, UMR 1319 MICALIS, F-78350, Jouy-en-Josas, France [2] AgroParisTech, UMR 1319 MICALIS, F-78350, Jouy-en-Josas, France [3] Commensal and Probiotics-Host Interactions Laboratory, INRA, UMR 1319 MICALIS, F-78350, Jouy-en-Josas, France.
Claire Cherbuy1] INRA, UMR 1319 MICALIS, F-78350, Jouy-en-Josas, France [2] AgroParisTech, UMR 1319 MICALIS, F-78350, Jouy-en-Josas, France [3] Commensal and Probiotics-Host Interactions Laboratory, INRA, UMR 1319 MICALIS, F-78350, Jouy-en-Josas, France.
AgroParisTech · FRInserm · FRCentre Hospitalier de Beauvais · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We investigated the effects of early colonizing bacteria on the colonic epithelium. We isolated dominant bacteria, Escherichia coli, Enterococcus faecalis, Lactobacillus intestinalis, Clostridium innocuum and a novel Fusobacterium spp., from the intestinal contents of conventional suckling rats and transferred them in different combinations into germfree (GF) adult rats. Animals were investigated after various times up to 21 days. Proliferative cell markers (Ki67, proliferating cell nuclear antigen, phospho-histone H3, cyclin A) were higher in rats monocolonized with E. coli than in GF at all time points, but not in rats monocolonized with E. faecalis. The mucin content of goblet cells declined shortly after E. coli administration whereas the mucus layer doubled in thickness. Fluorescence in situ hybridization analyses revealed that E. coli resides in this mucus layer. The epithelial mucin content progressively returned to baseline, following an increase in KLF4 and in the cell cycle arrest-related proteins p21(CIP1) and p27(KIP1). Markers of colonic differentiated cells involved in electrolyte (carbonic anhydrase II and slc26A3) and water (aquaglyceroporin3 (aqp3)) transport, and secretory responses to carbachol were modulated after E. coli inoculation suggesting that ion transport dynamics were also affected. The colonic responses to simplified microbiotas differed substantially according to whether or not E. coli was combined with the other four bacteria. Thus, proliferation markers increased substantially when E. coli was in the mix, but very much less when it was absent. This work demonstrates that a pioneer strain of E. coli elicits sequential epithelial remodeling affecting the structure, mucus layer and ionic movements and suggests this can result in a microbiota-compliant state.

Indexed as

AnimalsCell Cycle ProteinsCell DifferentiationCell ProliferationColonEscherichia coliHomeostasisIntestinal MucosaKruppel-Like Factor 4MaleMucinsRatsRats, Inbred F344Cell Cycle ProteinsKlf4 protein, ratKruppel-Like Factor 4Mucins

Identifiers

PMID25012905
PMCPMC4274421
OpenAlexW2093582854

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.