Evidence map›Paper›PMID 25012173›Full record

ArticleJournal of the American Society of Nephrology : JASN2015

Localization of APOL1 protein and mRNA in the human kidney: nondiseased tissue, primary cells, and immortalized cell lines.

Lijun Ma, Gregory S Shelness, James A Snipes, Mariana Murea, Peter A Antinozzi, Dongmei Cheng, Moin A Saleem, Simon C Satchell, Bernhard Banas, Peter W Mathieson and 9 more

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Society of Nephrology : JASN, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 94 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
94citing papers in PubMed, 3 pooled it
9.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

94 citing papers in PubMed, 3 syntheses or guidelines pooled it, 126 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Arteriosclerosis, thrombosis, and vascular biology · 2017
    Trial
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Novel Therapies inKidney international reports · 2023
    Review
  12. The metabolic effects of APOL1 in humans.Pflugers Archiv : European journal of physiology · 2023
    Review
  13. Article
  14. Review
  15. Sickle cell nephropathy: insights into the pediatric population.Pediatric nephrology (Berlin, Germany) · 2022
    Review
  16. Review
  17. Review
  18. Clinical journal of the American Society of Nephrology : CJASN · 2021
    Article
  19. Article
  20. Article

34 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 6 institutions in 3 countries.

Lijun MaInternal Medicine-Nephrology, lima@wakehealth.edu bfreedma@wakehealth.edu.
Gregory S ShelnessPathology-Lipid Sciences, and.
James A SnipesInternal Medicine-Nephrology.
Mariana MureaInternal Medicine-Nephrology.
Peter A AntinozziBiochemistry, Wake Forest School of Medicine, Winston-Salem, North Carolina;
Dongmei ChengPathology-Lipid Sciences, and.
Moin A SaleemChildren's Renal Unit, Bristol Royal Hospital for Children, University of Bristol, Bristol, United Kingdom;
Simon C SatchellLearning and Research Southmead Hospital Bristol, University of Bristol, Bristol, United Kingdom;
Bernhard BanasInternal Medicine II-Nephrology/Transplantation, University Medical Center, Regensburg, Germany;
Peter W MathiesonChildren's Renal Unit, Bristol Royal Hospital for Children, University of Bristol, Bristol, United Kingdom;
Matthias KretzlerDepartment of Internal Medicine-Nephrology, University of Michigan at Ann Arbor Medical School, Ann Arbor, Michigan;
Ashok K HemalDepartments of Surgical Sciences-Urology and.
Lawrence L RudelPathology-Lipid Sciences, and.
Snezana PetrovicInternal Medicine-Nephrology, Physiology and Pharmacology, Wake Forest School of Medicine, Winston-Salem, North Carolina;
Allison WeckerlePathology-Lipid Sciences, and.
Martin R PollakDivision of Nephrology, Department of Medicine, Beth Israel Deaconess Medical Center and Harvard Medical School, Boston, Massachusetts; and.
Michael D RossRenal Division, Department of Medicine, Brigham and Women's Hospital, Boston, Massachusetts.
John S ParksPathology-Lipid Sciences, and Biochemistry, Wake Forest School of Medicine, Winston-Salem, North Carolina;
Barry I FreedmanInternal Medicine-Nephrology, lima@wakehealth.edu bfreedma@wakehealth.edu.
Wake Forest University · USBristol Royal Hospital for Children · GBBrigham and Women's Hospital · USUniversity Hospital Regensburg · DEUniversity of Bristol · GBUniversity of Michigan–Ann Arbor · US

Funding

University of Michigan O'Brien Kidney Translational Core CenterP30DK081943 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PENNATHUR, SUBRAMANIAM · 2008 to 2022
$12.9M
Genetic Analysis of African American Hypertensive End-Stage Renal DiseaseR01DK070941 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI FREEDMAN, BARRY IRA · 2006 to 2015
$4.7M
Natural History of MYH9-Associated NephropathyR01DK084149 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI FREEDMAN, BARRY IRA · 2009 to 2012
$2.3M
NIDDK NIH HHS P30 DK081943NIDDK NIH HHS R01 DK070941NIDDK NIH HHS R01-DK070941NIDDK NIH HHS R01 DK084149NIDDK NIH HHS R01-DK084149
6 · The paper itself

Abstract

Although APOL1 gene variants are associated with nephropathy in African Americans, little is known about APOL1 protein synthesis, uptake, and localization in kidney cells. To address these questions, we examined APOL1 protein and mRNA localization in human kidney and human kidney-derived cell lines. Indirect immunofluorescence microscopy performed on nondiseased nephrectomy cryosections from persons with normal kidney function revealed that APOL1 protein was markedly enriched in podocytes (colocalized with synaptopodin and Wilms' tumor suppressor) and present in lower abundance in renal tubule cells. Fluorescence in situ hybridization detected APOL1 mRNA in glomeruli (podocytes and endothelial cells) and tubules, consistent with endogenous synthesis in these cell types. When these analyses were extended to renal-derived cell lines, quantitative RT-PCR did not detect APOL1 mRNA in human mesangial cells; however, abundant levels of APOL1 mRNA were observed in proximal tubule cells and glomerular endothelial cells, with lower expression in podocytes. Western blot analysis revealed corresponding levels of APOL1 protein in these cell lines. To explain the apparent discrepancy between the marked abundance of APOL1 protein in kidney podocytes observed in cryosections versus the lesser abundance in podocyte cell lines, we explored APOL1 cellular uptake. APOL1 protein was taken up readily by human podocytes in vitro but was not taken up efficiently by mesangial cells, glomerular endothelial cells, or proximal tubule cells. We hypothesize that the higher levels of APOL1 protein in human cryosectioned podocytes may reflect both endogenous protein synthesis and APOL1 uptake from the circulation or glomerular filtrate.

Indexed as

Apolipoprotein L1ApolipoproteinsBiopsyCell LineCells, CulturedEpithelial CellsHumansIn Vitro TechniquesKidneyKidney GlomerulusKidney Tubules, ProximalLipoproteins, HDLMesangial CellsMicroscopy, FluorescenceNephrectomyPodocytesAPOL1 protein, humanApolipoprotein L1ApolipoproteinsLipoproteins, HDLRNA, Messengerchronic kidney diseasegene expressiongene transcriptionlipidspathology

Identifiers

PMID25012173
PMCPMC4310650
OpenAlexW2112833823

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.