Evidence map›Paper›PMID 25011011›Full record

ArticleFungal genetics and biology : FG & B2014

The role of the de novo pyrimidine biosynthetic pathway in Cryptococcus neoformans high temperature growth and virulence.

Fabiano Assis de Gontijo, Renata C Pascon, Larissa Fernandes, Joel Machado, J Andrew Alspaugh, Marcelo A Vallim

Open access · hybridAbstract read
In one paragraph

Article in Fungal genetics and biology : FG & B, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 31 citations in OpenAlex.

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  13. F901318 represents a novel class of antifungal drug that inhibits dihydroorotate dehydrogenase.Proceedings of the National Academy of Sciences of the United States of America · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Fabiano Assis de GontijoUniversidade Federal de São Paulo, Departamento de Ciências Biológicas, Diadema, SP, Brazil.
Renata C PasconUniversidade Federal de São Paulo, Departamento de Ciências Biológicas, Diadema, SP, Brazil.
Larissa FernandesUniversidade de Brasília, Faculdade de Ceilândia, Brasília, DF, Brazil.
Joel MachadoUniversidade Federal de São Paulo, Departamento de Ciências Biológicas, Diadema, SP, Brazil.
J Andrew AlspaughDuke University School of Medicine, Department of Medicine, Durham, NC, USA.
Marcelo A VallimUniversidade Federal de São Paulo, Departamento de Ciências Biológicas, Diadema, SP, Brazil. Electronic address: marcelo.vallim@unifesp.br.
Universidade Federal de São Paulo · BRDuke University · USUniversidade de Brasília · BR

Funding

Coordinated Regulation of Virulence Genes in C. neoformansR01AI074677 · NIAID · DUKE UNIVERSITY · PI ALSPAUGH, ANDREW, WORMLEY, FLOYD L. · 2011 to 2020
$4.0M
Ras Signaling in C. neoformans virulence and developmentR01AI050128 · NIAID · DUKE UNIVERSITY · PI ALSPAUGH, ANDREW · 2003 to 2012
$3.0M
Coordinated Regulation of Virulence Genes in C. neoformansR56AI074677 · NIAID · DUKE UNIVERSITY · PI ALSPAUGH, ANDREW · 2009 to 2010
$608k
Ras signaling in C.neoformans virulence and developmentR21AI050128 · NIAID · DUKE UNIVERSITY · PI ALSPAUGH, J. ANDREW · 2002 to 2002
$305k
NIAID NIH HHS AI050128NIAID NIH HHS AI074677NIAID NIH HHS R01 AI050128NIAID NIH HHS R01 AI074677NIAID NIH HHS R21 AI050128NIAID NIH HHS R56 AI074677
6 · The paper itself

Abstract

Fungal infections are often difficult to treat due to the inherent similarities between fungal and animal cells and the resulting host toxicity from many antifungal compounds. Cryptococcus neoformans is an opportunistic fungal pathogen of humans that causes life-threatening disease, primarily in immunocompromised patients. Since antifungal therapy for this microorganism is limited, many investigators have explored novel drug targets aim at virulence factors, such as the ability to grow at mammalian physiological temperature (37°C). To address this issue, we used the Agrobacterium tumefaciens gene delivery system to create a random insertion mutagenesis library that was screened for altered growth at elevated temperatures. Among several mutants unable to grow at 37°C, we explored one bearing an interruption in the URA4 gene. This gene encodes dihydroorotase (DHOase) that is involved in the de novo synthesis of pyrimidine ribonucleotides. Loss of the C. neoformans Ura4 protein, by targeted gene interruption, resulted in an expected uracil/uridine auxotrophy and an unexpected high temperature growth defect. In addition, the ura4 mutant displayed phenotypic defects in other prominent virulence factors (melanin, capsule and phospholipase) and reduced stress response compared to wild type and reconstituted strains. Accordingly, this mutant had a decreased survival rate in macrophages and attenuated virulence in a murine model of cryptococcal infection. Quantitative PCR analysis suggests that this biosynthetic pathway is induced during the transition from 30°C to 37°C, and that transcriptional regulation of de novo and salvage pyrimidine pathway are under the control of the Ura4 protein.

Indexed as

AnimalsAntifungal AgentsCell LineCryptococcosisCryptococcus neoformansDihydroorotaseFungal ProteinsHot TemperatureMacrophagesMetabolic Networks and PathwaysMice, Inbred C57BLMutationPyrimidinesStress, PhysiologicalVirulenceAntifungal AgentsDihydroorotaseFungal ProteinspyrimidinePyrimidinesBasidiomycete yeastPyrimidine biosynthesisThermal tolerance

Identifiers

PMID25011011
PMCPMC4286198
OpenAlexW2114842284

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.