Evidence map›Paper›PMID 25010840›Full record

ArticlePloS one2014

Inhibition of human dyskerin as a new approach to target ribosome biogenesis.

Laura Rocchi, Arménio J M Barbosa, Carmine Onofrillo, Alberto Del Rio, Lorenzo Montanaro

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 44 citations in OpenAlex.

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  6. Clinical and translational medicine · 2024
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  13. The role of mMolecular cancer · 2021
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  14. Review
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  19. Review
  20. Predictive value of pseudouridine in prostate cancer.American journal of clinical and experimental urology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Laura RocchiDepartment of Experimental, Diagnostic and Specialty Medicine, Alma Mater Studiorum, University of Bologna, Bologna, Italy; Surgical Pathology Unit, University Hospital of Parma, Parma, Italy.
Arménio J M BarbosaDepartment of Experimental, Diagnostic and Specialty Medicine, Alma Mater Studiorum, University of Bologna, Bologna, Italy.
Carmine OnofrilloDepartment of Experimental, Diagnostic and Specialty Medicine, Alma Mater Studiorum, University of Bologna, Bologna, Italy; "Giorgio Prodi" Interdepartmental Cancer Research Centre, Alma Mater Studiorum, University of Bologna, Bologna, Italy.
Alberto Del RioDepartment of Experimental, Diagnostic and Specialty Medicine, Alma Mater Studiorum, University of Bologna, Bologna, Italy; Institute for Organic Chemistry and Photoreactivity, National Research Council, Bologna, Italy.
Lorenzo MontanaroDepartment of Experimental, Diagnostic and Specialty Medicine, Alma Mater Studiorum, University of Bologna, Bologna, Italy.
University of Bologna · ITInstitute of Organic Synthesis and Photoreactivity · ITUniversity of Parma · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The product of the DKC1 gene, dyskerin, is required for both ribosome biogenesis and telomerase complex stabilization. Targeting these cellular processes has been explored for the development of drugs to selectively or preferentially kill cancer cells. Presently, intense research is conducted involving the identification of new biological targets whose modulation may simultaneously interfere with multiple cellular functions that are known to be hyper-activated by neoplastic transformations. Here, we report, for the first time, the computational identification of small molecules able to inhibit dyskerin catalytic activity. Different in silico techniques were applied to select compounds and analyze the binding modes and the interaction patterns of ligands in the human dyskerin catalytic site. We also describe a newly developed and optimized fast real-time PCR assay that was used to detect dyskerin pseudouridylation activity in vitro. The identification of new dyskerin inhibitors constitutes the first proof of principle that the pseudouridylation activity can be modulated by means of small molecule agents. Therefore, the presented results, obtained through the usage of computational tools and experimental validation, indicate an alternative therapeutic strategy to target ribosome biogenesis pathway.

Indexed as

Base SequenceBiocatalysisCell Cycle ProteinsDrug DesignHumansModels, MolecularNuclear ProteinsProtein ConformationPseudouridineRibosomesRNA, RibosomalSmall Molecule LibrariesStructure-Activity RelationshipCell Cycle ProteinsDKC1 protein, humanNuclear ProteinsPseudouridineRNA, RibosomalSmall Molecule Libraries

Identifiers

PMID25010840
PMCPMC4092089
OpenAlexW2059552691

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.