Evidence map›Paper›PMID 25010663›Full record

ArticlePLoS genetics2014

Activation of the Arabidopsis thaliana immune system by combinations of common ACD6 alleles.

Marco Todesco, Sang-Tae Kim, Eunyoung Chae, Kirsten Bomblies, Maricris Zaidem, Lisa M Smith, Detlef Weigel, Roosa A E Laitinen

Abstract read
In one paragraph

Article in PLoS genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Phenotypic characterization and gene mapping of hybrid necrosis in Triticum durum-Haynaldia villosa amphiploids.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  6. Article
  7. Review
  8. Using wild relatives and related species to build climate resilience in Brassica crops.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Review
  9. Review
  10. Article
  11. Variation Patterns of NLR Clusters inPlant communications · 2020
    Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Marco TodescoDepartment of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Sang-Tae KimDepartment of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Eunyoung ChaeDepartment of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Kirsten BombliesDepartment of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Maricris ZaidemDepartment of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Lisa M SmithDepartment of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Detlef WeigelDepartment of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Roosa A E LaitinenDepartment of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A fundamental question in biology is how multicellular organisms distinguish self and non-self. The ability to make this distinction allows animals and plants to detect and respond to pathogens without triggering immune reactions directed against their own cells. In plants, inappropriate self-recognition results in the autonomous activation of the immune system, causing affected individuals to grow less well. These plants also suffer from spontaneous cell death, but are at the same time more resistant to pathogens. Known causes for such autonomous activation of the immune system are hyperactive alleles of immune regulators, or epistatic interactions between immune regulators and unlinked genes. We have discovered a third class, in which the Arabidopsis thaliana immune system is activated by interactions between natural alleles at a single locus, ACCELERATED CELL DEATH 6 (ACD6). There are two main types of these interacting alleles, one of which has evolved recently by partial resurrection of a pseudogene, and each type includes multiple functional variants. Most previously studies hybrid necrosis cases involve rare alleles found in geographically unrelated populations. These two types of ACD6 alleles instead occur at low frequency throughout the range of the species, and have risen to high frequency in the Northeast of Spain, suggesting a role in local adaptation. In addition, such hybrids occur in these populations in the wild. The extensive functional variation among ACD6 alleles points to a central role of this locus in fine-tuning pathogen defenses in natural populations.

Indexed as

AnkyrinsArabidopsisArabidopsis ProteinsCell DeathGene FrequencyPlant ImmunitySignal TransductionSpainACD6 protein, ArabidopsisAnkyrinsArabidopsis Proteins

Identifiers

PMID25010663
PMCPMC4091793

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.