Evidence map›Paper›PMID 25010489›Full record

ArticlePloS one2014

Tyrosine sulfation of human trypsin steers S2' subsite selectivity towards basic amino acids.

András Szabó, Moh'd A Salameh, Maren Ludwig, Evette S Radisky, Miklós Sahin-Tóth

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Pathogenic cellular role of the p.L104P human cationic trypsinogen variant in chronic pancreatitis.American journal of physiology. Gastrointestinal and liver physiology · 2016
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

András SzabóDepartment of Molecular and Cell Biology, Boston University Henry M. Goldman School of Dental Medicine, Boston, Massachusetts, United States of America.
Moh'd A SalamehDepartment of Cancer Biology, Mayo Clinic Cancer Center, Jacksonville, Florida, United States of America.
Maren LudwigDepartment of Molecular and Cell Biology, Boston University Henry M. Goldman School of Dental Medicine, Boston, Massachusetts, United States of America; Pediatric Nutritional Medicine & EKFZ, Technische Universität München (TUM), Munich, Germany.
Evette S RadiskyDepartment of Cancer Biology, Mayo Clinic Cancer Center, Jacksonville, Florida, United States of America.
Miklós Sahin-TóthDepartment of Molecular and Cell Biology, Boston University Henry M. Goldman School of Dental Medicine, Boston, Massachusetts, United States of America.
Boston University · USMayo Clinic in Florida · USTechnical University of Munich · DE

Funding

Chymotrypsin in pancreatitisR01DK082412 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SAHIN-TOTH, MIKLOS · 2009 to 2024
$5.8M
Molecular Pathomechanism of Hereditary PancreatitisR01DK058088 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SAHIN-TOTH, MIKLOS · 2001 to 2019
$5.3M
Inhibiting serine protease-induced prostate cancer progressionR01CA154387 · NCI · MAYO CLINIC JACKSONVILLE · PI RADISKY, EVETTE S · 2013 to 2017
$1.6M
Pancreatic elastasesR01DK095753 · NIDDK · BOSTON UNIVERSITY MEDICAL CAMPUS · PI SAHIN-TOTH, MIKLOS · 2013 to 2016
$1.4M
NCI NIH HHS R01 CA154387NCI NIH HHS R01CA154387NIDDK NIH HHS R01 DK058088NIDDK NIH HHS R01DK058088NIDDK NIH HHS R01 DK082412NIDDK NIH HHS R01DK082412NIDDK NIH HHS R01 DK095753NIDDK NIH HHS R01DK095753
6 · The paper itself

Abstract

Human cationic and anionic trypsins are sulfated on Tyr154, a residue which helps to shape the prime side substrate-binding subsites. Here, we used phage display technology to assess the significance of tyrosine sulfation for the specificity of human trypsins. The prime side residues P1'-P4' in the binding loop of bovine pancreatic trypsin inhibitor (BPTI) were fully randomized and tight binding inhibitor phages were selected against non-sulfated and sulfated human cationic trypsin. The selection pattern for the two targets differed mostly at the P2' position, where variants selected against non-sulfated trypsin contained primarily aliphatic residues (Leu, Ile, Met), while variants selected against sulfated trypsin were enriched also for Arg. BPTI variants carrying Arg, Lys, Ile, Leu or Ala at the P2' position of the binding loop were purified and equilibrium dissociation constants were determined against non-sulfated and sulfated cationic and anionic human trypsins. BPTI variants harboring apolar residues at P2' exhibited 3-12-fold lower affinity to sulfated trypsin relative to the non-sulfated enzyme, whereas BPTI variants containing basic residues at P2' had comparable affinity to both trypsin forms. Taken together, the observations demonstrate that the tyrosyl sulfate in human trypsins interacts with the P2' position of the substrate-like inhibitor and this modification increases P2' selectivity towards basic side chains.

Indexed as

Amino Acids, BasicAmino Acid SequenceAnimalsAnionsAprotininCationsCattleCell Surface Display TechniquesHumansModels, MolecularMolecular Sequence DataMutant ProteinsProtein BindingSubstrate SpecificitySulfatesTrypsinAmino Acids, BasicAnionsAprotininCationsMutant ProteinsSulfatesTrypsinTyrosine

Identifiers

PMID25010489
PMCPMC4092071
OpenAlexW2078904787

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.