Evidence map›Paper›PMID 25010280›Full record

ArticleVirology2014

The ecology of primate retroviruses - an assessment of 12 years of retroviral studies in the Taï national park area, Côte d׳Ivoire.

Jan F Gogarten, Chantal Akoua-Koffi, Sebastien Calvignac-Spencer, Siv Aina J Leendertz, Sabrina Weiss, Emmanuel Couacy-Hymann, Inza Koné, Martine Peeters, Roman M Wittig, Christophe Boesch and 2 more

Abstract read
In one paragraph

Article in Virology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Jan F GogartenResearch group Epidemiology of Highly Pathogenic Microorganisms RKI, Berlin, Germany; Primatology department, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany; Department of Biology, McGill University, Montreal, Quebec, Canada.
Chantal Akoua-KoffiReseach Center for the Development and Teaching Hospital, Université Alassane Ouattara de Bouake, Cote d׳Ivoire.
Sebastien Calvignac-SpencerResearch group Epidemiology of Highly Pathogenic Microorganisms RKI, Berlin, Germany.
Siv Aina J LeendertzResearch group Epidemiology of Highly Pathogenic Microorganisms RKI, Berlin, Germany.
Sabrina WeissResearch group Epidemiology of Highly Pathogenic Microorganisms RKI, Berlin, Germany.
Emmanuel Couacy-HymannCentral Laboratory for Animal Diseases, Bingerville, Côte d׳Ivoire.
Inza KonéTaï Monkey Project, Centre Suisse de Recherches Scientifiques, B.P. 1303 Abidjan, Côte d'Ivoire and Laboratory of Zoology, University of Cocody, 22 B.P. 582, Abidjan 22, Côte d׳Ivoire.
Martine PeetersUMI 233, TransVIHMI, Institute for Research and Development (IRD) and University of Montpellier 1, Montpellier, France.
Roman M WittigPrimatology department, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany.
Christophe BoeschPrimatology department, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany.
Beatrice H HahnDepartment of Microbiology and Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States of America.
Fabian H LeendertzResearch group Epidemiology of Highly Pathogenic Microorganisms RKI, Berlin, Germany. Electronic address: leendertzf@rki.de.

Funding

Natural SIV Reservoirs and Human Zoonotic RiskR01AI050529 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI HAHN, BEATRICE H · 2001 to 2022
$6.1M
Natural SIV Reservoirs and Human Zoonotic RiskR37AI050529 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI HAHN, BEATRICE H · 2008 to 2017
$5.7M
CIHRNIAID NIH HHS R01 AI050529NIAID NIH HHS R37 AI050529
6 · The paper itself

Abstract

The existence and genetic make-up of most primate retroviruses was revealed by studies of bushmeat and fecal samples from unhabituated primate communities. For these, detailed data on intra- and within-species contact rates are generally missing, which makes identification of factors influencing transmission a challenging task. Here we present an assessment of 12 years of research on primate retroviruses in the Taï National Park area, Côte d'Ivoire. We discuss insights gained into the prevalence, within- and cross-species transmission of primate retroviruses (including towards local human populations) and the importance of virus-host interactions in determining cross-species transmission risk. Finally we discuss how retroviruses ecology and evolution may change in a shifting environment and identify avenues for future research.

Indexed as

AnimalsAnimals, WildCote d'IvoireHumansPhylogenyPrimate DiseasesPrimatesRetroviridaeRetroviridae InfectionsZoonosesEmerging infectious diseasesInfectious disease ecologySimian foamy virusSimian immunodeficiency virusSimian t-cell leukemia virus type 1Zoonosis

Identifiers

PMID25010280
PMCPMC4241856

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.