Evidence map›Paper›PMID 25009391›Full record

ArticleWorld journal of gastroenterology2014

Association of human leukocyte antigen DQB1 and DRB1 alleles with chronic hepatitis B.

Levent Doganay, Arta Fejzullahu, Seyma Katrinli, Feruze Yilmaz Enc, Oguzhan Ozturk, Yasar Colak, Celal Ulasoglu, Ilyas Tuncer, Gizem Dinler Doganay

Open access · hybridAbstract read
In one paragraph

Article in World journal of gastroenterology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
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  8. Review
  9. [Host factors influencing the clinical outcome of chronic hepatitis B virus infection].Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology · 2017
    Article
  10. Article
  11. Article
  12. Article
  13. Clinical Relevance of HLA Gene Variants in HBV Infection.Journal of immunology research · 2016
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Levent DoganayLevent Doganay, Feruze Yilmaz Enc, Yasar Colak, Celal Ulasoglu, Ilyas Tuncer, Department of Gastroenterology, Goztepe Teaching and Research Hospital, Medeniyet University, Istanbul 34722, Turkey.
Arta FejzullahuLevent Doganay, Feruze Yilmaz Enc, Yasar Colak, Celal Ulasoglu, Ilyas Tuncer, Department of Gastroenterology, Goztepe Teaching and Research Hospital, Medeniyet University, Istanbul 34722, Turkey.
Seyma KatrinliLevent Doganay, Feruze Yilmaz Enc, Yasar Colak, Celal Ulasoglu, Ilyas Tuncer, Department of Gastroenterology, Goztepe Teaching and Research Hospital, Medeniyet University, Istanbul 34722, Turkey.
Feruze Yilmaz EncLevent Doganay, Feruze Yilmaz Enc, Yasar Colak, Celal Ulasoglu, Ilyas Tuncer, Department of Gastroenterology, Goztepe Teaching and Research Hospital, Medeniyet University, Istanbul 34722, Turkey.
Oguzhan OzturkLevent Doganay, Feruze Yilmaz Enc, Yasar Colak, Celal Ulasoglu, Ilyas Tuncer, Department of Gastroenterology, Goztepe Teaching and Research Hospital, Medeniyet University, Istanbul 34722, Turkey.
Yasar ColakLevent Doganay, Feruze Yilmaz Enc, Yasar Colak, Celal Ulasoglu, Ilyas Tuncer, Department of Gastroenterology, Goztepe Teaching and Research Hospital, Medeniyet University, Istanbul 34722, Turkey.
Celal UlasogluLevent Doganay, Feruze Yilmaz Enc, Yasar Colak, Celal Ulasoglu, Ilyas Tuncer, Department of Gastroenterology, Goztepe Teaching and Research Hospital, Medeniyet University, Istanbul 34722, Turkey.
Ilyas TuncerLevent Doganay, Feruze Yilmaz Enc, Yasar Colak, Celal Ulasoglu, Ilyas Tuncer, Department of Gastroenterology, Goztepe Teaching and Research Hospital, Medeniyet University, Istanbul 34722, Turkey.
Gizem Dinler DoganayLevent Doganay, Feruze Yilmaz Enc, Yasar Colak, Celal Ulasoglu, Ilyas Tuncer, Department of Gastroenterology, Goztepe Teaching and Research Hospital, Medeniyet University, Istanbul 34722, Turkey.
Ümraniye Eğitim ve Araştırma Hastanesi · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo investigate the effect of human leukocyte antigen (HLA) DRB1 and DQB1 alleles on the inactive and advanced stages of chronic hepatitis B.

methodsPatient records at a single institution's hepatology clinic were reviewed. Demographic data, laboratory results, endoscopy results, virological parameters, biopsy scores and treatment statuses were recorded. In total, 355 patients were eligible for the study, of whom 226 (63.7%) were male. Overall, 82 (23.1%) were hepatitis B early antigen (HBeAg) positive, 87 (24.5%) had cirrhosis, and 66 (18.6%) had inactive disease. The presence of DQB1 and DRB1 alleles was determined by polymerase chain reaction with sequence-specific primers. The distribution of the genotyped alleles among patients with cirrhosis and patients with chronic active hepatitis was analyzed.

resultsThe most frequent HLA DQB1 allele was DQB1*03:01 (48.2%), and the most frequent HLA DRB1 allele was DRB1*13/14 (51.8%). DQB1*05:01 was more frequent in patients with active disease than in inactive patients (27% vs 9.1%; P = 0.002, Pc = 0.026). DRB1*07 was rare in patients with cirrhosis compared with non-cirrhotics (3.4% vs 16%; P = 0.002, Pc = 0.022). Older age (P < 0.001) and male gender (P = 0.008) were the other factors that affected the presence of cirrhosis. In a multivariate logistic regression analysis, DRB1*07 remained a significant negative predictor of cirrhosis (P = 0.015). A bioinformatics analysis revealed that a polymorphic amino acid sequence in DRB1*07 may alter interaction with the T-cell recognition site.

conclusionThis study demonstrates that HLA alleles may influence cirrhosis development and disease activity in Turkish chronic hepatitis B patients.

Indexed as

Age FactorsAmino Acid SequenceChi-Square DistributionComputational BiologyFemaleGene FrequencyGenetic Predisposition to DiseaseHepatitis B, ChronicHLA-DQ beta-ChainsHLA-DRB1 ChainsHumansLiver CirrhosisLogistic ModelsMaleMolecular Sequence DataMultivariate AnalysisHLA-DQB1 antigenHLA-DQ beta-ChainsHLA-DRB1 ChainsChronic active hepatitisCirrhosisHepatitis BHuman leukocyte antigen DQHuman leukocyte antigen DR

Identifiers

PMID25009391
PMCPMC4081690
OpenAlexW2172031895

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.