Evidence map›Paper›PMID 25009281›Full record

ArticleMolecular biology of the cell2014

DIPA-family coiled-coils bind conserved isoform-specific head domain of p120-catenin family: potential roles in hydrocephalus and heterotopia.

Nicholas O Markham, Caleb A Doll, Michael R Dohn, Rachel K Miller, Huapeng Yu, Robert J Coffey, Pierre D McCrea, Joshua T Gamse, Albert B Reynolds

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Genetic and molecular mechanisms of hydrocephalus.Frontiers in molecular neuroscience · 2024
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Delta-Catenin as a Modulator of Rho GTPases in Neurons.Frontiers in cellular neuroscience · 2022
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Functional roles of p120ctn family of proteins in central neurons.Seminars in cell & developmental biology · 2017
    Review
  16. Article
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Nicholas O MarkhamVanderbilt-Ingram Cancer Center, Cancer Biology Department, Vanderbilt University Medical Center, Nashville, TN 37232.
Caleb A DollDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37235.
Michael R DohnVanderbilt-Ingram Cancer Center, Cancer Biology Department, Vanderbilt University Medical Center, Nashville, TN 37232.
Rachel K MillerDepartment of Biochemistry and Molecular Biology, University of Texas MD Anderson Cancer Center, Houston, TX 77030.
Huapeng YuVanderbilt-Ingram Cancer Center, Cancer Biology Department, Vanderbilt University Medical Center, Nashville, TN 37232.
Robert J CoffeyEpithelial Biology Center, Department of Cell and Developmental Biology, Vanderbilt University, Nashville, TN 37232.
Pierre D McCreaDepartment of Biochemistry and Molecular Biology, University of Texas MD Anderson Cancer Center, Houston, TX 77030.
Joshua T GamseDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37235.
Albert B ReynoldsVanderbilt-Ingram Cancer Center, Cancer Biology Department, Vanderbilt University Medical Center, Nashville, TN 37232 al.reynolds@vanderbilt.edu.
Vanderbilt University Medical Center · USVanderbilt University · USThe University of Texas MD Anderson Cancer Center · US

Funding

The Vanderbilt Institute for Clinical and Translational Research (VICTR)UL1TR000445 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BERNARD, GORDON RAPHAEL · 2012 to 2016
$41.4M
Understanding and Controlling p120 Dysfunction in CRCP50CA095103 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI COFFEY, ROBERT J. · 2002 to 2017
$33.6M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007347 · NIGMS · VANDERBILT UNIVERSITY · PI WILLIAMS, CHRISTOPHER S. · 1985 to 2023
$26.3M
MULTIDISCIPLINARY BASIC RESEARCH TRAINING IN CANCERT32CA009592 · NCI · VANDERBILT UNIVERSITY · PI Justin M Balko, Julie A Rhoades (Sterling) · 1987 to 2026
$10.4M
TRANSFORMING GROWTH FACTORS IN COLONIC NEOPLASIAR01CA046413 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI COFFEY, ROBERT J. · 1988 to 2016
$8.8M
p120-catenin sub-family functionsR01GM052112 · NIGMS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI MCCREA, PIERRE D · 1995 to 2010
$3.5M
PL20 AND CELL CELL ADHESIONR01CA055724 · NCI · VANDERBILT UNIVERSITY · PI REYNOLDS, ALBERT B · 1997 to 2010
$2.9M
Nuclear functions of catenin subfamiliesR01GM107079 · NIGMS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI MCCREA, PIERRE D · 2014 to 2017
$1.8M
Genetic Analysis of the L/R Asymmetric Parapineal Neurons in the Zebrafish BrainR01HD054534 · NICHD · VANDERBILT UNIVERSITY · PI GAMSE, JOSHUA T · 2007 to 2011
$1.7M
A mouse model for p120 downregulation in cancerR01CA111947 · NCI · VANDERBILT UNIVERSITY · PI REYNOLDS, ALBERT B · 2005 to 2009
$1.7M
Role of p120-catenin in cell transformationR01GM102524 · NIGMS · VANDERBILT UNIVERSITY · PI REYNOLDS, ALBERT B · 2013 to 2016
$1.2M
The Role of Planar Cell Polarity Signals in Shaping Kidney TubulesK01DK092320 · NIDDK · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI MILLER, RACHEL KATHERINE · 2012 to 2016
$584k
NCATS NIH HHS UL1 TR000445NCI NIH HHS P30-CA11947NCI NIH HHS P50 CA095103NCI NIH HHS P50-CA95103NCI NIH HHS R01 CA046413NCI NIH HHS R01CA111947NCI NIH HHS R01CA55724NCI NIH HHS T32 CA009592NICHD NIH HHS R01 HD054534NICHD NIH HHS R01HD054534NIDDK NIH HHS K01 DK092320NIGMS NIH HHS R01 GM052112NIGMS NIH HHS R01 GM102524NIGMS NIH HHS R01 GM107079NIGMS NIH HHS T32 GM007347NIGMS NIH HHS T32 GM07347
6 · The paper itself

Abstract

p120-catenin (p120) modulates adherens junction (AJ) dynamics by controlling the stability of classical cadherins. Among all p120 isoforms, p120-3A and p120-1A are the most prevalent. Both stabilize cadherins, but p120-3A is preferred in epithelia, whereas p120-1A takes precedence in neurons, fibroblasts, and macrophages. During epithelial-to-mesenchymal transition, E- to N-cadherin switching coincides with p120-3A to -1A alternative splicing. These isoforms differ by a 101-amino acid "head domain" comprising the p120-1A N-terminus. Although its exact role is unknown, the head domain likely mediates developmental and cancer-associated events linked to p120-1A expression (e.g., motility, invasion, metastasis). Here we identified delta-interacting protein A (DIPA) as the first head domain-specific binding partner and candidate mediator of isoform 1A activity. DIPA colocalizes with AJs in a p120-1A- but not 3A-dependent manner. Moreover, all DIPA family members (Ccdc85a, Ccdc85b/DIPA, and Ccdc85c) interact reciprocally with p120 family members (p120, δ-catenin, p0071, and ARVCF), suggesting significant functional overlap. During zebrafish neural tube development, both knockdown and overexpression of DIPA phenocopy N-cadherin mutations, an effect bearing functional ties to a reported mouse hydrocephalus phenotype associated with Ccdc85c. These studies identify a novel, highly conserved interaction between two protein families that may participate either individually or collectively in N-cadherin-mediated development.

Indexed as

Adherens JunctionsAmino Acid SequenceAnimalsCadherinsCateninsCell Line, TumorConserved SequenceDelta CateninDogsGene Knockdown TechniquesHEK293 CellsHumansHydrocephalusMadin Darby Canine Kidney CellsMolecular Sequence DataNeural Tube DefectsCadherinsCateninsDelta CateninProtein Isoforms

Identifiers

PMID25009281
PMCPMC4148249
OpenAlexW2324844220

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.