Evidence map›Paper›PMID 25009050›Full record

ArticleJournal of clinical microbiology2014

Diagnosis of Pneumocystis jirovecii pneumonia in immunocompromised patients by real-time PCR: a 4-year prospective study.

Florence Robert-Gangneux, Sorya Belaz, Matthieu Revest, Pierre Tattevin, Stéphane Jouneau, Olivier Decaux, Sylviane Chevrier, Yves Le Tulzo, Jean-Pierre Gangneux

Registry-linked trialOpen access · bronzeAbstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT06691321 (Efficacy of Caspofungin for Pneumocystis Jirovecii Pneumonia in People Living With HIV/AIDS.), which is not on this map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
6.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT06691321 recruitingnot on this mapstarted 2023, after this paper: background citation

Efficacy of Caspofungin for Pneumocystis Jirovecii Pneumonia in People Living With HIV/AIDS.

TypeobservationalSponsorInstituto Nacional de Enfermedades RespiratoriasRan2023 to 2025Enrolled60ConditionsHIV-1-infection, Pneumocystis Pneumonia
3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 118 citations in OpenAlex.

  1. Journal of fungi (Basel, Switzerland) · 2026
    Article
  2. Evaluation of the ELITe InGenius PCR assay compared with immunofluorescence for Pneumocystis jirovecii detection in respiratory samples.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
    Article
  3. Article
  4. Advances in pathogen detection ofInfectious medicine · 2025
    Review
  5. JHLT open · 2025
    Article
  6. Article
  7. Review
  8. Article
  9. Clinical microbiology reviews · 2024
    Review
  10. Quantitative real time PCR for distinction betweenFrontiers in cellular and infection microbiology · 2024
    Article
  11. Article
  12. Journal of fungi (Basel, Switzerland) · 2023
    Article
  13. Article
  14. Is It Possible to DifferentiateJournal of fungi (Basel, Switzerland) · 2021
    Article
  15. Article
  16. Observational
  17. Pneumocystis jirovecii Disease: Basis for the Revised EORTC/MSGERC Invasive Fungal Disease Definitions in Individuals Without Human Immunodeficiency Virus.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2021
    Article
  18. Quantitative PCR to Discriminate BetweenFrontiers in microbiology · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Florence Robert-GangneuxService of Parasitology and Mycology, Centre Hospitalier Universitaire de Rennes, Rennes, France INSERM U1085-IRSET, Université Rennes 1, Rennes, France florence.robert-gangneux@univ-rennes1.fr.
Sorya BelazService of Parasitology and Mycology, Centre Hospitalier Universitaire de Rennes, Rennes, France INSERM U1085-IRSET, Université Rennes 1, Rennes, France.
Matthieu RevestService of Infectious Diseases, Centre Hospitalier Universitaire de Rennes, Rennes, France.
Pierre TattevinService of Infectious Diseases, Centre Hospitalier Universitaire de Rennes, Rennes, France.
Stéphane JouneauINSERM U1085-IRSET, Université Rennes 1, Rennes, France Service of Pneumology, Centre Hospitalier Universitaire de Rennes, Rennes, France.
Olivier DecauxDepartment of Internal Medicine, Centre Hospitalier Universitaire de Rennes, Rennes, France.
Sylviane ChevrierINSERM U1085-IRSET, Université Rennes 1, Rennes, France.
Yves Le TulzoIntensive Care Unit, Centre Hospitalier Universitaire de Rennes, Rennes, France.
Jean-Pierre GangneuxService of Parasitology and Mycology, Centre Hospitalier Universitaire de Rennes, Rennes, France INSERM U1085-IRSET, Université Rennes 1, Rennes, France.
Centre Hospitalier Universitaire de Rennes · FRInserm · FRInstitut de Recherche en Santé, Environnement et Travail · FRUniversité de Rennes · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pneumocystis jirovecii pneumonia (PCP) is a life-threatening infection in immunocompromised patients. Quantitative real-time PCR (qPCR) is more sensitive than microscopic examination for the detection of P. jirovecii but also detects colonized patients. Hence, its positive predictive value (PPV) needs evaluation. In this 4-year prospective observational study, all immunocompromised patients with acute respiratory symptoms who were investigated for PCP were included, totaling 659 patients (814 bronchoalveolar lavage fluid samples). Patients with negative microscopy but positive qPCR were classified through medical chart review as having retained PCP, possible PCP, or colonization, and their clinical outcomes were compared to those of patients with microscopically proven PCP. Overall, 119 patients were included for analysis, of whom 35, 41, and 43 were classified as having retained PCP, possible PCP, and colonization, respectively. The 35 patients with retained PCP had clinical findings similar to those with microscopically proven PCP but lower fungal loads (P < 0.001) and were mainly non-HIV-infected patients (P < 0.05). Although the mean amplification threshold was higher in colonized patients, it was not possible to determine a discriminant qPCR cutoff. The PPV of qPCR in patients with negative microscopy were 29.4% and 63.8% when considering retained PCP and retained plus possible PCP, respectively. Patients with possible PCP had a higher mortality rate than patients with retained PCP or colonization (63% versus 3% and 16%, respectively); patients who died had not received co-trimoxazole. In conclusion, qPCR is a useful tool to diagnose PCP in non-HIV patients, and treatment might be better targeted through a multicomponent algorithm including both clinical/radiological parameters and qPCR results.

Indexed as

AgedFemaleHumansImmunocompromised HostLungMaleMiddle AgedMolecular Diagnostic TechniquesPneumocystis cariniiPneumonia, PneumocystisProspective StudiesRadiographyReal-Time Polymerase Chain Reaction

Identifiers

PMID25009050
PMCPMC4313164
OpenAlexW2028378939

What OpenQuestion holds

Textmetadata
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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.