ArticleMolecular biology reports2014
Genome-wide analysis of the R2R3-MYB transcription factor gene family in sweet orange (Citrus sinensis).
Article in Molecular biology reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.
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29 citing papers in PubMed, 79 citations in OpenAlex.
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- Genome-wide analysis of the R2R3-MYB gene family inFrontiers in plant science · 2023Article
- Genome-wide identification, classification and expression analysis ofFrontiers in plant science · 2023Article
- A Novel R2R3-MYB Transcription Factor FtMYB22 Negatively Regulates Salt and Drought Stress through ABA-Dependent Pathway.International journal of molecular sciences · 2022Article
- MYB transcription factor family in sweet cherry (Prunus avium L.): genome-wide investigation, evolution, structure, characterization and expression patterns.BMC plant biology · 2022Article
- Genome-wide identification of myeloblastosis gene family and its response to cadmium stress inFrontiers in plant science · 2022Article
- Genome-Wide Identification and Analysis of theGenes · 2021Article
- Genome-wide analysis and expression profiles of PdeMYB transcription factors in colored-leaf poplar (Populus deltoids).BMC plant biology · 2021Article
- PtrMYB3, a R2R3-MYB Transcription Factor fromAntioxidants (Basel, Switzerland) · 2021Article
- Genome-Wide Analysis Reveals the Potential Role of MYB Transcription Factors in Floral Scent Formation inFrontiers in plant science · 2021Article
- Identification of Isoflavonoid Biosynthesis-Related R2R3-MYB Transcription Factors inInternational journal of genomics · 2021Article
- Citrus PH4-Noemi regulatory complex is involved in proanthocyanidin biosynthesis via a positive feedback loop.Journal of experimental botany · 2020Article
- Genome-Wide Identification and Characterization of the NAC Transcription Factor Family inInternational journal of molecular sciences · 2020Article
- Dissecting the Genome-Wide Evolution and Function of R2R3-MYB Transcription Factor Family inGenes · 2019Article
- Overexpression of a MYB Family Gene,Frontiers in plant science · 2019Article
- Identification and Functional Characterization of a Cold-Related Protein, BcHHP5, in Pak-Choi (International journal of molecular sciences · 2018Article
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Authors and funding
5 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
MYB transcription factor represents one of the largest gene families in plant genomes. Sweet orange (Citrus sinensis) is one of the most important fruit crops worldwide, and recently the genome has been sequenced. This provides an opportunity to investigate the organization and evolutionary characteristics of sweet orange MYB genes from whole genome view. In the present study, we identified 100 R2R3-MYB genes in the sweet orange genome. A comprehensive analysis of this gene family was performed, including the phylogeny, gene structure, chromosomal localization and expression pattern analyses. The 100 genes were divided into 29 subfamilies based on the sequence similarity and phylogeny, and the classification was also well supported by the highly conserved exon/intron structures and motif composition. The phylogenomic comparison of MYB gene family among sweet orange and related plant species, Arabidopsis, cacao and papaya suggested the existence of functional divergence during evolution. Expression profiling indicated that sweet orange R2R3-MYB genes exhibited distinct temporal and spatial expression patterns. Our analysis suggested that the sweet orange MYB genes may play important roles in different plant biological processes, some of which may be potentially involved in citrus fruit quality. These results will be useful for future functional analysis of the MYB gene family in sweet orange.
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