Evidence map›Paper›PMID 25007286›Full record

ArticleGut microbes2014

Immune response to JC virus T antigen in patients with and without colorectal neoplasia.

Lindsay D Butcher, Melissa Garcia, Mildred Arnold, Hideki Ueno, Ajay Goel, C Richard Boland

Open access · bronzeAbstract read
In one paragraph

Article in Gut microbes, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Human polyomaviruses and cancer: an overview.Clinics (Sao Paulo, Brazil) · 2018
    Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Lindsay D ButcherInstitute of Biomedical Studies; Baylor University; Waco, TX USA; Gastrointestinal Cancer Research Laboratory; Baylor Research Institute and Charles A. Sammons Cancer Center; Baylor University Medical Center; Dallas, TX USA.
Melissa GarciaGastrointestinal Cancer Research Laboratory; Baylor Research Institute and Charles A. Sammons Cancer Center; Baylor University Medical Center; Dallas, TX USA.
Mildred ArnoldGastrointestinal Cancer Research Laboratory; Baylor Research Institute and Charles A. Sammons Cancer Center; Baylor University Medical Center; Dallas, TX USA.
Hideki UenoBaylor Institute for Immunology Research; Baylor Research Institute; Baylor University Medical Center; Dallas, TX USA.
Ajay GoelGastrointestinal Cancer Research Laboratory; Baylor Research Institute and Charles A. Sammons Cancer Center; Baylor University Medical Center; Dallas, TX USA.
C Richard BolandGastrointestinal Cancer Research Laboratory; Baylor Research Institute and Charles A. Sammons Cancer Center; Baylor University Medical Center; Dallas, TX USA.
Baylor University Medical Center · USBaylor Institute for Rehabilitation · US

Funding

The Biology and Diagnosis of HNPCCR01CA072851 · NCI · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI GOEL, AJAY · 1996 to 2019
$6.6M
JC Virus and Tumor Formation in the Human ColonR01CA098572 · NCI · BAYLOR RESEARCH INSTITUTE · PI BOLAND, CLEMENT RICHARD · 2004 to 2014
$2.7M
NCI NIH HHS R01 CA072851NCI NIH HHS R01 CA098572NCI NIH HHS R01-CA098572
6 · The paper itself

Abstract

JC virus (JCV) is a polyomavirus that infects approximately 75% of the population and encodes a T antigen (T-Ag) gene, which is oncogenic and inactivates the p53 and pRb/p107/p130 protein families. Previous work in our lab has identified the presence of T-Ag in colorectal neoplasms. While JCV remains in a latent state for the majority of those infected, we hypothesized that a disturbance in immunological control may permit JCV to reactivate, which may be involved in the development of colorectal neoplasia. Our aim was to determine the cell mediated immune response to JCV T-Ag, and determine if it is altered in patients with colorectal adenomatous polyps (AP) or cancers (CRC). Peripheral blood mononuclear cells (PBMCs) isolated from the blood of patients undergoing colonoscopy or colorectal surgery were stimulated by a peptide library covering the entire T-Ag protein of JCV. Cytokine production and T cell proliferation were evaluated following T-Ag stimulation using Luminex and flow cytometry assays. JCV T-Ag peptides stimulated secretion of IL-2, which induced T cell expansion in all three groups. However, stronger IL-10 and IL-13 production was seen in patients without colorectal neoplasms. IP-10 was produced at very high levels in all groups, but not significantly differently between groups. Most patients exhibited CD4(+) and CD8(+) T cells in response to stimulation by the T-Ag clusters. The combination of IL-2 and IP-10 secretion indicates the presence of T-Ag-specific Th1 cells in all patients, which is higher in patients without carcinoma.

Indexed as

AdolescentAdultAgedAged, 80 and overAntigens, Viral, TumorCell ProliferationColorectal NeoplasmsCytokinesFemaleFlow CytometryHumansImmunoassayJC VirusLeukocytes, MononuclearMaleMiddle AgedAntigens, Viral, TumorCytokinescolorectal cancerinterferon γ-induced protein-10interleukin-10interleukin-13interleukin-2JC virusT cells

Identifiers

PMID25007286
PMCPMC5515464
OpenAlexW1969659215

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.