Evidence map›Paper›PMID 25007174›Full record

ArticleACS chemical biology2014

Direct evidence of iron uptake by the Gram-positive siderophore-shuttle mechanism without iron reduction.

Tatsuya Fukushima, Benjamin E Allred, Kenneth N Raymond

Open access · greenAbstract read
In one paragraph

Article in ACS chemical biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Untargeted LC-QToF-MS profiling of the soybean (Frontiers in plant science · 2026
    Article
  6. Article
  7. Targeting Iron - Respiratory Reciprocity Promotes Bacterial Death.bioRxiv : the preprint server for biology · 2024
    Article
  8. Siderophores as tools and treatments.npj antimicrobials and resistance · 2024
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Electroactivity across the cell wall of Gram-positive bacteria.Computational and structural biotechnology journal · 2020
    Review
  14. Article
  15. Article
  16. Article
  17. Coordination Chemistry of Microbial Iron Transport.Accounts of chemical research · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Tatsuya FukushimaDepartment of Chemistry, University of California , Berkeley, California 94720-1460, United States.
Benjamin E Allred
Kenneth N Raymond
University of California, Berkeley · US

Funding

Coordination Chemistry of Microbial Iron Transport CompoundsR01AI011744 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI RAYMOND, KENNETH N · 1986 to 2013
$4.1M
NIAID NIH HHS AI11744NIAID NIH HHS R01 AI011744
6 · The paper itself

Abstract

Iron is an essential element for all organisms, and microorganisms produce small molecule iron-chelators, siderophores, to efficiently acquire Fe(III). Gram-positive bacteria possess lipoprotein siderophore-binding proteins (SBPs) on the membrane. Some of the SBPs bind both apo-siderophores (iron-free) and Fe-siderophore (iron-chelated) and only import Fe-siderophores. When the SBP initially binds an apo-siderophore, the SBP uses the Gram-positive siderophore-shuttle mechanism (the SBPs exchange Fe(III) from a Fe-siderophore to the apo-siderophore bound to the protein) and/or displacement mechanism (the apo-siderophore bound to the SBP is released and a Fe-siderophore is then bound to the protein) to import the Fe-siderophore. Previously, we reported that the Bacillus cereus SBP, YxeB, exchanges Fe(III) from a ferrioxamine B (FO) to a desferrioxamine B (DFO) bound to YxeB using the siderophore-shuttle mechanism although the iron exchange was indirectly elucidated. Synthetic Cr-DFO (inert metal FO analog) and Ga-DFO (nonreducible FO analog) are bound to YxeB and imported via YxeB and the corresponding permeases and ATPase. YxeB exchanges Fe(III) from FO and Ga(III) from Ga-DFO to DFO bound to the protein, indicating that the metal-exchange occurs without metal reduction. YxeB also binds DFO derivatives including acetylated DFO (apo-siderophore) and acetylated FO (AcFO, Fe-siderophore). The iron from AcFO is transferred to DFO when bound to YxeB, giving direct evidence of iron exchange. Moreover, YxeB also uses the displacement mechanism when ferrichrome (Fch) is added to the DFO:YxeB complex. Uptake by the displacement mechanism is a minor pathway compared to the shuttle mechanism.

Indexed as

Bacillus cereusBacterial ProteinsBiological TransportDeferoxamineGram-Positive BacteriaIronIron Chelating AgentsKineticsMembrane Transport ProteinsOxidation-ReductionSiderophoresBacterial ProteinsDeferoxamineIronIron Chelating AgentsMembrane Transport ProteinsSiderophores

Identifiers

PMID25007174
PMCPMC4168784
OpenAlexW2318899801

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.