ArticlePloS one2014
Genome-wide delineation of natural variation for pod shatter resistance in Brassica napus.
Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 105 papers, 1 of them a synthesis that pooled it.
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Who cites it
105 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Discovery of common loci and candidate genes for controlling salt-alkali tolerance and yield-related traits in Brassica napus L.Plant cell reports · 2023Pooled it
- Novel Molecular Markers and Immune-Related Candidate Genes for Blackleg Resistance in Rapeseed: A Genome-Wide Analysis.International journal of molecular sciences · 2026Article
- Scaling up orphan crop research: genebank genetics highlight geographic structure in cultivated cowpea from 10 617 global accessions.The Plant journal : for cell and molecular biology · 2026Article
- The reference genome sequence of the scarlet follicle, Sterculia lanceolata, reveals a paleo-polyploidization and its impact on fruit quality and fruit dehiscence.Functional & integrative genomics · 2026Article
- Candidate genomic regions underlying capsule shattering in sesame revealed by multi-model GWAS and field-based phenotyping.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- DArTseq Analysis of Cypriot Common Bean Germplasm Unveils an Assortment of Unexplored Genetic Variability.Plants (Basel, Switzerland) · 2025Article
- Uncovering a stable QTLMolecular breeding : new strategies in plant improvement · 2025Article
- Article
- Comparative analysis of RAD-seq methods for SNP discovery and genetic diversity assessment in oil seed crop safflower.Scientific reports · 2025Article
- Whole-genome mapping reveals QTLs linked to key agronomic traits in bi-parental populations of field cress (Lepidium campestre).BMC plant biology · 2025Article
- Identification and validation of genomic regions for pod shatter resistance in Brassica rapa using QTL-seq and traditional QTL mapping.BMC plant biology · 2025Article
- Comprehensive Morphological and Molecular Insights into Drought Tolerance Variation at Germination Stage inPlants (Basel, Switzerland) · 2024Article
- Genotyping by sequencing; a strategy for identification and mapping of induced mutation in newly developed wheat mutant lines.Functional & integrative genomics · 2024Article
- Identification of quantitative trait loci and candidate genes for pod shatter resistance in Brassica carinata.BMC plant biology · 2024Article
- Genome-wide identification of GH28 family and insight into its contributions to pod shattering resistance in Brassica napus L.BMC genomics · 2024Article
- Genetic study for seed germination and shattering inHeliyon · 2024Article
- A Brassica carinata pan-genome platform for Brassica crop improvement.Plant communications · 2024Article
- Novel SNP markers for flowering and seed quality traits in faba bean (Frontiers in plant science · 2024Article
- Developing genomic tools to assist turnip rape [Frontiers in genetics · 2024Article
- Comparative transcriptome and co-expression network analysis revealed the genes associated with senescence and polygalacturonase activity involved in pod shattering of rapeseed.Biotechnology for biofuels and bioproducts · 2023Article
45 more citing papers are in PubMed but not listed here.
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Authors and funding
15 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Resistance to pod shattering (shatter resistance) is a target trait for global rapeseed (canola, Brassica napus L.), improvement programs to minimise grain loss in the mature standing crop, and during windrowing and mechanical harvest. We describe the genetic basis of natural variation for shatter resistance in B. napus and show that several quantitative trait loci (QTL) control this trait. To identify loci underlying shatter resistance, we used a novel genotyping-by-sequencing approach DArT-Seq. QTL analysis detected a total of 12 significant QTL on chromosomes A03, A07, A09, C03, C04, C06, and C08; which jointly account for approximately 57% of the genotypic variation in shatter resistance. Through Genome-Wide Association Studies, we show that a large number of loci, including those that are involved in shattering in Arabidopsis, account for variation in shatter resistance in diverse B. napus germplasm. Our results indicate that genetic diversity for shatter resistance genes in B. napus is limited; many of the genes that might control this trait were not included during the natural creation of this species, or were not retained during the domestication and selection process. We speculate that valuable diversity for this trait was lost during the natural creation of B. napus. To improve shatter resistance, breeders will need to target the introduction of useful alleles especially from genotypes of other related species of Brassica, such as those that we have identified.
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