Evidence map›Paper›PMID 25006263›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Divergence of Drosophila melanogaster repeatomes in response to a sharp microclimate contrast in Evolution Canyon, Israel.

Young Bun Kim, Jung Hun Oh, Lauren J McIver, Eugenia Rashkovetsky, Katarzyna Michalak, Harold R Garner, Lin Kang, Eviatar Nevo, Abraham B Korol, Pawel Michalak

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
  2. Satellite DNA Genomics: The Ongoing Story.International journal of molecular sciences · 2025
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  7. Satellitome Analysis ofInternational journal of molecular sciences · 2024
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  8. Article
  9. Review
  10. Review
  11. Article
  12. Satellitome Analysis of the Pacific OysterInternational journal of molecular sciences · 2021
    Article
  13. Article
  14. Genomic Tackling of Human Satellite DNA: Breaking Barriers through Time.International journal of molecular sciences · 2021
    Review
  15. Exploring Satellite DNAs: Specificities of Bivalve Mollusks Genomes.Progress in molecular and subcellular biology · 2021
    Article
  16. Article
  17. Article
  18. Review
  19. Genomic divergence and adaptive convergence inProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Young Bun KimVirginia Bioinformatics Institute and.
Jung Hun OhDepartment of Medical Physics, Memorial Sloan-Kettering Cancer Center, New York, NY 10065; and.
Lauren J McIverVirginia Bioinformatics Institute and.
Eugenia RashkovetskyInstitute of Evolution, Haifa University, Haifa 3498838, Israel.
Katarzyna MichalakVirginia Bioinformatics Institute and.
Harold R GarnerVirginia Bioinformatics Institute andDepartments of Biological Sciences and.
Lin KangVirginia Bioinformatics Institute and.
Eviatar NevoInstitute of Evolution, Haifa University, Haifa 3498838, Israel nevo@research.haifa.ac.il pawel@vbi.vt.edu.
Abraham B KorolInstitute of Evolution, Haifa University, Haifa 3498838, Israel.
Pawel MichalakVirginia Bioinformatics Institute andDepartments of Biological Sciences andFish and Wildlife Conservation, Virginia Tech, Blacksburg, VA 24061; nevo@research.haifa.ac.il pawel@vbi.vt.edu.
University of Haifa · ILMemorial Sloan Kettering Cancer Center · USVirginia Tech · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Repeat sequences, especially mobile elements, make up large portions of most eukaryotic genomes and provide enormous, albeit commonly underappreciated, evolutionary potential. We analyzed repeatomes of Drosophila melanogaster that have been diverging in response to a microclimate contrast in Evolution Canyon (Mount Carmel, Israel), a natural evolutionary laboratory with two abutting slopes at an average distance of only 200 m, which pose a constant ecological challenge to their local biotas. Flies inhabiting the colder and more humid north-facing slope carried about 6% more transposable elements than those from the hot and dry south-facing slope, in parallel to a suite of other genetic and phenotypic differences between the two populations. Nearly 50% of all mobile element insertions were slope unique, with many of them disrupting coding sequences of genes critical for cognition, olfaction, and thermotolerance, consistent with the observed patterns of thermotolerance differences and assortative mating.

Indexed as

Biological EvolutionGenetic VariationMicroclimateAnimalsBase SequenceChromosomes, InsectDNA Transposable ElementsDrosophila melanogasterIsraelMicrosatellite RepeatsPolymorphism, Single NucleotideRepetitive Sequences, Nucleic AcidX ChromosomeDNA Transposable Elementsadaptive evolutiongenome sequencingincipient speciationmicrosatellite

Identifiers

PMID25006263
PMCPMC4115526
OpenAlexW1974105363

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.