Evidence map›Paper›PMID 25006247›Full record

ArticleThe Journal of biological chemistry2014

Identification of multifaceted binding modes for pyrin and ASC pyrin domains gives insights into pyrin inflammasome assembly.

Parimala R Vajjhala, Sebastian Kaiser, Sarah J Smith, Qi-Rui Ong, Stephanie L Soh, Katryn J Stacey, Justine M Hill

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 45 citations in OpenAlex.

  1. Review
  2. ThebioRxiv : the preprint server for biology · 2026
    Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Review
  8. Familial Mediterranean fever gene variations could triggerRheumatology advances in practice · 2024
    Article
  9. Article
  10. Review
  11. Review
  12. Review
  13. Review
  14. Article
  15. Intracellular Antiviral Immunity.Advances in virus research · 2018
    Review
  16. Article
  17. Assembly and regulation of ASC specks.Cellular and molecular life sciences : CMLS · 2017
    Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Parimala R VajjhalaFrom the School of Chemistry and Molecular Biosciences and p.vajjhala@uq.edu.au.
Sebastian KaiserFrom the School of Chemistry and Molecular Biosciences and.
Sarah J SmithFrom the School of Chemistry and Molecular Biosciences and.
Qi-Rui OngFrom the School of Chemistry and Molecular Biosciences and.
Stephanie L SohFrom the School of Chemistry and Molecular Biosciences and.
Katryn J StaceyFrom the School of Chemistry and Molecular Biosciences and.
Justine M HillFrom the School of Chemistry and Molecular Biosciences and Centre for Advanced Imaging, The University of Queensland, Brisbane, Queensland 4072, Australia.
University of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Inflammasomes are macromolecular complexes that mediate inflammatory and cell death responses to pathogens and cellular stress signals. Dysregulated inflammasome activation is associated with autoinflammatory syndromes and several common diseases. During inflammasome assembly, oligomerized cytosolic pattern recognition receptors recruit procaspase-1 and procaspase-8 via the adaptor protein ASC. Inflammasome assembly is mediated by pyrin domains (PYDs) and caspase recruitment domains, which are protein interaction domains of the death fold superfamily. However, the molecular details of their interactions are poorly understood. We have studied the interaction between ASC and pyrin PYDs that mediates ASC recruitment to the pyrin inflammasome, which is implicated in the pathogenesis of familial Mediterranean fever. We demonstrate that both the ASC and pyrin PYDs have multifaceted binding modes, involving three sites on pyrin PYD and two sites on ASC PYD. Molecular docking of pyrin-ASC PYD complexes showed that pyrin PYD can simultaneously interact with up to three ASC PYDs. Furthermore, ASC PYD can self-associate and interact with pyrin, consistent with previous reports that pyrin promotes ASC clustering to form a proinflammatory complex. Finally, the effects of familial Mediterranean fever-associated mutations, R42W and A89T, on structural and functional properties of pyrin PYD were investigated. The R42W mutation had a significant effect on structure and increased stability. Although the R42W mutant exhibited reduced interaction with ASC, it also bound less to the pyrin B-box domain responsible for autoinhibition and hence may be constitutively active. Our data give new insights into the binding modes of PYDs and inflammasome architecture.

Indexed as

Amino Acid SequenceBinding SitesCARD Signaling Adaptor ProteinsCytoskeletal ProteinsHumansInflammasomesModels, MolecularMolecular Sequence DataMutagenesisNuclear Magnetic Resonance, BiomolecularProtein BindingPyrinSequence Homology, Amino AcidCARD Signaling Adaptor ProteinsCytoskeletal ProteinsInflammasomesMEFV protein, humanPYCARD protein, humanPyrinDeath DomainFamilial Mediterranean FeverInflammasomeInflammationInnate ImmunityMutagenesisPattern Recognition Receptor (PRR)Protein ComplexProtein-Protein InteractionPyrin

Identifiers

PMID25006247
PMCPMC4156052
OpenAlexW2086505556

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.