Evidence map›Paper›PMID 25004127›Full record

ArticlePloS one2014

In situ natural product discovery via an artificial marine sponge.

James J La Clair, Steven T Loveridge, Karen Tenney, Mark O'Neil-Johnson, Eli Chapman, Phillip Crews

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. I-SMEL a Big Catch!ACS central science · 2023
    Article
  3. ACS central science · 2023
    Article
  4. Accessing Nystatin through Mariculture.Molecules (Basel, Switzerland) · 2021
    Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

James J La ClairXenobe Research Institute, San Diego, California, United States of America.
Steven T LoveridgeDepartment of Chemistry and Biochemistry, University of California Santa Cruz, Santa Cruz, California, United States of America.
Karen TenneyDepartment of Chemistry and Biochemistry, University of California Santa Cruz, Santa Cruz, California, United States of America.
Mark O'Neil-JohnsonLead Discovery and Rapid Structure Elucidation Group, Sequoia Sciences, Inc., St. Louis, Missouri, United States of America.
Eli ChapmanDepartment of Pharmacology and Toxicology, College of Pharmacy, University of Arizona, Tucson, Arizona, United States of America.
Phillip CrewsDepartment of Chemistry and Biochemistry, University of California Santa Cruz, Santa Cruz, California, United States of America.
University of California, Santa Cruz · USSequoia Sciences (United States) · USUniversity of Arizona · USXenobe Research Institute · US

Funding

NOVEL CYTOTOXIC NATURAL PRODUCTS FROM MARINE SPONGESR01CA047135 · NCI · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI CREWS, PHIL, VALERIOTE, FREDERICK AUGUSTUS · 1989 to 2017
$8.1M
NCI NIH HHS R01 CA047135NCI NIH HHS R01CA047135
6 · The paper itself

Abstract

There is continuing international interest in exploring and developing the therapeutic potential of marine-derived small molecules. Balancing the strategies for ocean based sampling of source organisms versus the potential to endanger fragile ecosystems poses a substantial challenge. In order to mitigate such environmental impacts, we have developed a deployable artificial sponge. This report provides details on its design followed by evidence that it faithfully recapitulates traditional natural product collection protocols. Retrieving this artificial sponge from a tropical ecosystem after deployment for 320 hours afforded three actin-targeting jasplakinolide depsipeptides that had been discovered two decades earlier using traditional sponge specimen collection and isolation procedures. The successful outcome achieved here could reinvigorate marine natural products research, by producing new environmentally innocuous sources of natural products and providing a means to probe the true biosynthetic origins of complex marine-derived scaffolds.

Indexed as

Biological ProductsDrug DiscoveryAnimalsBiomimeticsDepsipeptidesEcosystemPoriferaBiological ProductsDepsipeptidesjasplakinolide

Identifiers

PMID25004127
PMCPMC4086721
OpenAlexW1994855181

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.