Evidence map›Paper›PMID 25004123›Full record

ArticlePloS one2014

Effects of different tissue microenvironments on gene expression in breast cancer cells.

Gaelle Rondeau, Parisa Abedinpour, Prerak Desai, Veronique T Baron, Per Borgstrom, John Welsh

Abstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Foe or friend? Janus-faces of the neurovascular unit in the formation of brain metastases.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2018
    Review
  3. [Tumor Cells and Micro-environment in Brain Metastases].Zhongguo fei ai za zhi = Chinese journal of lung cancer · 2016
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Interpretation of immunohistochemistry data of tumor should consider microenvironmental factors.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2015
    Article
  9. Article
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Gaelle RondeauVaccine Research Institute of San Diego, San Diego, California, United States of America.
Parisa AbedinpourVaccine Research Institute of San Diego, San Diego, California, United States of America.
Prerak DesaiVaccine Research Institute of San Diego, San Diego, California, United States of America.
Veronique T BaronVaccine Research Institute of San Diego, San Diego, California, United States of America.
Per BorgstromVaccine Research Institute of San Diego, San Diego, California, United States of America.
John WelshVaccine Research Institute of San Diego, San Diego, California, United States of America.

Funding

Tracking Cancer Stem Cell EvolutionR21CA133638 · NCI · VACCINE RESEARCH INSTITUTE OF SAN DIEGO · PI WELSH, JOHN T · 2008 to 2009
$475k
NCI NIH HHS 1R21CA133638NCI NIH HHS R21 CA133638
6 · The paper itself

Abstract

In metastasis, circulating tumor cells penetrate the walls of blood vessels and enter the metastatic target tissue, thereby becoming exposed to novel and relatively unsupportive microenvironments. In the new microenvironments, the tumor cells often remain in a dormant state indefinitely and must adapt before they are able to successfully colonize the tissue. Very little is known about this adaptive process. We studied temporal changes in gene expression when breast cancer cells adapt to survive and grow on brain, bone marrow, and lung tissue maintained in an in vivo culture system, as models of the metastatic colonization of these tissues. We observed the transient activation of genes typically associated with homeostasis and stress during the initial stages of adaptation, followed by the activation of genes that mediate more advanced functions, such as elaboration of cell morphology and cell division, as the cells adapted to thrive in the host tissue microenvironment. We also observed the temporary induction of genes characteristic of the host tissue, which was particularly evident when tumor cells were grown on brain tissue. These early transient gene expression events suggest potential points of therapeutic intervention that are not evident in data from well-established tumors.

Indexed as

Gene Expression ProfilingTumor MicroenvironmentBiomarkers, TumorBreast NeoplasmsFemaleHumansOligonucleotide Array Sequence AnalysisTumor Cells, CulturedBiomarkers, Tumor

Identifiers

PMID25004123
PMCPMC4086928

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.