Evidence map›Paper›PMID 25003707›Full record

ArticlePloS one2014

Functional and molecular surveillance of Helicobacter pylori antibiotic resistance in Kuala Lumpur.

Xinsheng Teh, Yalda Khosravi, Woon Ching Lee, Alex Hwong Ruey Leow, Mun Fai Loke, Jamuna Vadivelu, Khean Lee Goh

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it, 60 citations in OpenAlex.

  1. Pooled it
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  14. Observational
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Xinsheng TehDepartment of Medical Microbiology, University of Malaya, Faculty of Medicine, Kuala Lumpur, Malaysia.
Yalda KhosraviDepartment of Medical Microbiology, University of Malaya, Faculty of Medicine, Kuala Lumpur, Malaysia.
Woon Ching LeeDepartment of Medical Microbiology, University of Malaya, Faculty of Medicine, Kuala Lumpur, Malaysia.
Alex Hwong Ruey LeowDepartment of Medicine, University of Malaya, Faculty of Medicine, Kuala Lumpur, Malaysia.
Mun Fai LokeDepartment of Medical Microbiology, University of Malaya, Faculty of Medicine, Kuala Lumpur, Malaysia.
Jamuna VadiveluDepartment of Medical Microbiology, University of Malaya, Faculty of Medicine, Kuala Lumpur, Malaysia.
Khean Lee GohDepartment of Medicine, University of Malaya, Faculty of Medicine, Kuala Lumpur, Malaysia.
University of Malaya · MYUniversity Malaya Medical Centre · MY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHelicobacter pylori is the etiological agent for diseases ranging from chronic gastritis and peptic ulcer disease to gastric adenocarcinoma and primary gastric B-cell lymphoma. Emergence of resistance to antibiotics possesses a challenge to the effort to eradicate H. pylori using conventional antibiotic-based therapies. The molecular mechanisms that contribute to the resistance of these strains have yet to be identified and are important for understanding the evolutional pattern and selective pressure imposed by the environment. METHODS AND

findingsH. pylori was isolated from 102 patients diagnosed with gastrointestinal diseases, who underwent endoscopy at University Malaya Medical Centre (UMMC). The isolates were tested for their susceptibility on eleven antibiotics using Etest. Based on susceptibility test, 32.3% of the isolates were found to have primary metronidazole resistance; followed by clarithromycin (6.8%) and fluoroquinolones (6.8%). To further investigate the resistant strains, mutational patterns of gene rdxA, frxA, gyrA, gyrB, and 23S rRNA were studied. Consistent with the previous reports, metronidazole resistance was prevalent in the local population. However, clarithromycin, fluoroquinolone and multi-drug resistance were shown to be emerging. Molecular patterns correlated well with phenotypic data. Interestingly, multi-drug resistant (MDR) strains were found to be associated with higher minimum inhibitory concentration (MIC) than their single-drug resistant (SDR) counterparts. Most importantly, clarithromycin-resistant strains were suggested to have a higher incidence for developing multi-drug resistance.

conclusionData from this study highlighted the urgency to monitor closely the prevalence of antibiotic resistance in the Malaysian population; especially that of clarithromycin and multi-drug resistance. Further study is needed to understand the molecular association between clarithromycin resistance and multi-drug resistance in H. pylori. The report serves a reminder that a strict antibiotic usage policy is needed in Malaysia and other developing countries (especially those where H. pylori prevalence remained high).

Indexed as

Drug Resistance, BacterialAnti-Bacterial AgentsClarithromycinDrug Resistance, MultipleFluoroquinolonesGenes, BacterialGenetic VariationHelicobacter InfectionsHelicobacter pyloriHumansMalaysiaMetronidazoleMicrobial Sensitivity TestsMutationPrevalenceRNA, Ribosomal, 23SAnti-Bacterial AgentsClarithromycinFluoroquinolonesMetronidazoleRNA, Ribosomal, 23S

Identifiers

PMID25003707
PMCPMC4086822
OpenAlexW2092677552

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.