Evidence map›Paper›PMID 25003334›Full record

ArticlePloS one2014

Establishing an in vivo assay system to identify components involved in environmental RNA interference in the western corn rootworm.

Keita Miyata, Parthasarathy Ramaseshadri, Yuanji Zhang, Gerrit Segers, Renata Bolognesi, Yoshinori Tomoyasu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 85 citations in OpenAlex.

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  14. RNAi-based pest control: Production, application and the fate of dsRNA.Frontiers in bioengineering and biotechnology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Keita MiyataDepartment of Biology, Miami University, Oxford, Ohio, United States of America.
Parthasarathy RamaseshadriBiotechnology Division, Monsanto Company, Chesterfield, Missouri, United States of America.
Yuanji ZhangBiotechnology Division, Monsanto Company, Chesterfield, Missouri, United States of America.
Gerrit SegersBiotechnology Division, Monsanto Company, Chesterfield, Missouri, United States of America.
Renata BolognesiBiotechnology Division, Monsanto Company, Chesterfield, Missouri, United States of America.
Yoshinori TomoyasuDepartment of Biology, Miami University, Oxford, Ohio, United States of America.
Monsanto (United States) · USMiami University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The discovery of environmental RNA interference (RNAi), in which gene expression is suppressed via feeding with double-stranded RNA (dsRNA) molecules, opened the door to the practical application of RNAi-based techniques in crop pest management. The western corn rootworm (WCR, Diabrotica virgifera virgifera) is one of the most devastating corn pests in North America. Interestingly, WCR displays a robust environmental RNAi response, raising the possibility of applying an RNAi-based pest management strategy to this pest. Understanding the molecular mechanisms involved in the WCR environmental RNAi process will allow for determining the rate limiting steps involved with dsRNA toxicity and potential dsRNA resistance mechanisms in WCR. In this study, we have established a two-step in vivo assay system, which allows us to evaluate the involvement of genes in environmental RNAi in WCR. We show that laccase 2 and ebony, critical cuticle pigmentation/tanning genes, can be used as marker genes in our assay system, with ebony being a more stable marker to monitor RNAi activity. In addition, we optimized the dsRNA dose and length for the assay, and confirmed that this assay system is sensitive to detect well-known RNAi components such as Dicer-2 and Argonaute-2. We also evaluated two WCR sid1- like (sil) genes with this assay system. This system will be useful to quickly survey candidate systemic RNAi genes in WCR, and also will be adaptable for a genome-wide RNAi screening to give us an unbiased view of the environmental/systemic RNAi pathway in WCR.

Indexed as

RNA, Double-StrandedRNA InterferenceAnimalsColeopteraGene DosageGenes, InsectInsect ControlLife Cycle StagesPest Control, BiologicalPhenotypeReproducibility of ResultsRNA, Double-Stranded

Identifiers

PMID25003334
PMCPMC4086966
OpenAlexW2026599884

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.