Evidence map›Paper›PMID 25002485›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Extensive pathogenicity of mitochondrial heteroplasmy in healthy human individuals.

Kaixiong Ye, Jian Lu, Fei Ma, Alon Keinan, Zhenglong Gu

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 155 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
155citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

155 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Human studies of mitochondrial biology demonstrate an overall lack of binary sex differences: A multivariate meta-analysis.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2022
    Pooled it
  3. Review
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  5. Article
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  9. Article
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  11. Mitochondrial haplogroups, but not heteroplasmy, are associated with midlife cognitive function.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
    Article
  12. Article
  13. Review
  14. Article
  15. Exploring the oncogenic impact of heteroplasmicMitochondrial communications · 2025
    Article
  16. Review
  17. Mitochondrial DNA Damage and Its Repair Mechanisms in Aging Oocytes.International journal of molecular sciences · 2024
    Review
  18. Article
  19. Article
  20. Article

95 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Kaixiong YeDivision of Nutritional Sciences, Cornell University, Ithaca, NY 14853; zg27@cornell.edu ky279@cornell.edu.
Jian LuDivision of Nutritional Sciences, Cornell University, Ithaca, NY 14853;State Key Laboratory of Protein and Plant Gene Research, Center for Bioinformatics, College of Life Sciences, Peking-Tsinghua Center for Life Sciences, Peking University, Beijing 100871, China;
Fei MaDepartment of Medical Oncology, Cancer Hospital, Chinese Academy of Medical Sciences, Beijing 100021, China; and.
Alon KeinanDepartment of Biostatistics and Computational Biology, Cornell University, Ithaca, NY 14853.
Zhenglong GuDivision of Nutritional Sciences, Cornell University, Ithaca, NY 14853; zg27@cornell.edu ky279@cornell.edu.

Funding

The X-factor of complex disease: From population genetics to GWAS of Chromosome XR01HG006849 · NHGRI · CORNELL UNIVERSITY · PI CLARK, ANDREW G · 2013 to 2020
$2.3M
Genetic and Evolutionary Basis of Fungal Drug ResistanceR01AI085286 · NIAID · CORNELL UNIVERSITY · PI GU, ZHENGLONG · 2010 to 2014
$1.7M
NHGRI NIH HHS R01 HG006849NIAID NIH HHS 1R01AI085286NIAID NIH HHS R01 AI085286
6 · The paper itself

Abstract

A majority of mitochondrial DNA (mtDNA) mutations reported to be implicated in diseases are heteroplasmic, a status with coexisting mtDNA variants in a single cell. Quantifying the prevalence of mitochondrial heteroplasmy and its pathogenic effect in healthy individuals could further our understanding of its possible roles in various diseases. A total of 1,085 human individuals from 14 global populations have been sequenced by the 1000 Genomes Project to a mean coverage of ∼2,000× on mtDNA. Using a combination of stringent thresholds and a maximum-likelihood method to define heteroplasmy, we demonstrated that ∼90% of the individuals carry at least one heteroplasmy. At least 20% of individuals harbor heteroplasmies reported to be implicated in disease. Mitochondrial heteroplasmy tend to show high pathogenicity, and is significantly overrepresented in disease-associated loci. Consistent with their deleterious effect, heteroplasmies with derived allele frequency larger than 60% within an individual show a significant reduction in pathogenicity, indicating the action of purifying selection. Purifying selection on heteroplasmies can also be inferred from nonsynonymous and synonymous heteroplasmy comparison and the unfolded site frequency spectra for different functional sites in mtDNA. Nevertheless, in comparison with population polymorphic mtDNA mutations, the purifying selection is much less efficient in removing heteroplasmic mutations. The prevalence of mitochondrial heteroplasmy with high pathogenic potential in healthy individuals, along with the possibility of these mutations drifting to high frequency inside a subpopulation of cells across lifespan, emphasizes the importance of managing mitochondrial heteroplasmy to prevent disease progression.

Indexed as

HealthDNA, MitochondrialHumansMitochondriaMitochondrial DiseasesPolymorphism, GeneticRNA, TransferSelection, GeneticDNA, MitochondrialRNA, Transfer

Identifiers

PMID25002485
PMCPMC4115537

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.