Evidence map›Paper›PMID 25002431›Full record

ArticleApplied and environmental microbiology2014

Molecular characterization of three Lactobacillus delbrueckii subsp. bulgaricus phages.

Eoghan Casey, Jennifer Mahony, Mary O'Connell-Motherway, Francesca Bottacini, Anneleen Cornelissen, Horst Neve, Knut J Heller, Jean-Paul Noben, Fabio Dal Bello, Douwe van Sinderen

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Selection of mutantApplied and environmental microbiology · 2023
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  7. Novel N4-Like Bacteriophages of Pectobacterium atrosepticum.Pharmaceuticals (Basel, Switzerland) · 2018
    Article
  8. Article
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  11. Biocidal Inactivation ofFrontiers in microbiology · 2017
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Bacteriophage
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Eoghan CaseySchool of Microbiology, University College Cork, Cork, Ireland.
Jennifer MahonySchool of Microbiology, University College Cork, Cork, Ireland.
Mary O'Connell-MotherwaySchool of Microbiology, University College Cork, Cork, Ireland Alimentary Pharmabiotic Centre, University College Cork, Cork, Ireland.
Francesca BottaciniAlimentary Pharmabiotic Centre, University College Cork, Cork, Ireland.
Anneleen CornelissenSchool of Microbiology, University College Cork, Cork, Ireland.
Horst NeveDepartment of Microbiology and Biotechnology, Max Rubner-Institut, Kiel, Germany.
Knut J HellerDepartment of Microbiology and Biotechnology, Max Rubner-Institut, Kiel, Germany.
Jean-Paul NobenHasselt University, Biomedical Research Institute and Transnationale Universiteit Limburg, School of Life Sciences, Diepenbeek, Belgium.
Fabio Dal BelloSacco srl, Cadorago, Italy.
Douwe van SinderenSchool of Microbiology, University College Cork, Cork, Ireland Alimentary Pharmabiotic Centre, University College Cork, Cork, Ireland d.vansinderen@ucc.ie.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, three phages infecting Lactobacillus delbrueckii subsp. bulgaricus, named Ld3, Ld17, and Ld25A, were isolated from whey samples obtained from various industrial fermentations. These phages were further characterized in a multifaceted approach: (i) biological and physical characterization through host range analysis and electron microscopy; (ii) genetic assessment through genome analysis; (iii) mass spectrometry analysis of the structural components of the phages; and (iv), for one phage, transcriptional analysis by Northern hybridization, reverse transcription-PCR, and primer extension. The three obtained phage genomes display high levels of sequence identity to each other and to genomes of the so-called group b L. delbrueckii phages c5, LL-Ku, and phiLdb, where some of the observed differences are believed to be responsible for host range variations.

Indexed as

Host SpecificityBacteriophagesDNA, ViralFood MicrobiologyGene Expression ProfilingGene OrderLactobacillus delbrueckiiMicroscopy, Electron, TransmissionMolecular Sequence DataSequence Analysis, DNASyntenyViral ProteinsVirionDNA, ViralViral Proteins

Identifiers

PMID25002431
PMCPMC4178594

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.