Evidence map›Paper›PMID 25001407›Full record

ArticleEukaryotic cell2014

Identification of two nickel ion-induced genes, NCI16 and PcGST1, in Paramecium caudatum.

Yasuhiro Takenaka, Nobuyuki Haga, Ikuo Inoue, Takanari Nakano, Masaaki Ikeda, Shigehiro Katayama, Takuya Awata

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact, top 88% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yasuhiro TakenakaDepartment of Diabetes and Endocrinology, Saitama Medical University, Saitama, Japan t_yasu@saitama-med.ac.jp i1901018@saitama-med.ac.jp.
Nobuyuki HagaDepartment of Biotechnology, Ishinomaki Senshu University, Ishinomaki, Miyagi, Japan.
Ikuo InoueDepartment of Diabetes and Endocrinology, Saitama Medical University, Saitama, Japan t_yasu@saitama-med.ac.jp i1901018@saitama-med.ac.jp.
Takanari NakanoDepartment of Biochemistry, Saitama Medical University, Saitama, Japan.
Masaaki IkedaDepartment of Physiology, Saitama Medical University, Saitama, Japan.
Shigehiro KatayamaDepartment of Diabetes and Endocrinology, Saitama Medical University, Saitama, Japan.
Takuya AwataDepartment of Diabetes and Endocrinology, Saitama Medical University, Saitama, Japan.
Saitama Medical University · JPIshinomaki Senshu University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Here, we describe the isolation of two nickel-induced genes in Paramecium caudatum, NCI16 and PcGST1, by subtractive hybridization. NCI16 encoded a predicted four-transmembrane domain protein (∼16 kDa) of unknown function, and PcGST1 encoded glutathione S-transferase (GST; ∼25 kDa) with GST and glutathione peroxidase (GPx) activities. Exposing cells to cobalt chloride also caused the moderate upregulation of NCI16 and PcGST1 mRNAs. Both nickel sulfate and cobalt chloride dose dependently induced NCI16 and PcGST1 mRNAs, but with different profiles. Nickel treatment caused a continuous increase in PcGST1 and NCI16 mRNA levels for up to 3 and 6 days, respectively, and a notable increase in H₂O₂ concentrations in P. caudatum. NCI16 expression was significantly enhanced by incubating cells with H₂O₂, implying that NCI16 induction in the presence of nickel ions is caused by reactive oxygen species (ROS). On the other hand, PcGST1 was highly induced by the antioxidant tert-butylhydroquinone (tBHQ) but not by H2O2, suggesting that different mechanisms mediate the induction of NCI16 and PcGST1. We introduced a luciferase reporter vector with an ∼0.42-kb putative PcGST1 promoter into cells and then exposed the transformants to nickel sulfate. This resulted in significant luciferase upregulation, indicating that the putative PcGST1 promoter contains a nickel-responsive element. Our nickel-inducible system also may be applicable to the efficient expression of proteins that are toxic to host cells or require temporal control.

Indexed as

AntioxidantsGlutathione TransferaseHydrogen PeroxideIonsMembrane ProteinsNickelOxidative StressParamecium caudatumProtozoan ProteinsReactive Oxygen SpeciesRNA, MessengerAntioxidantsGlutathione TransferaseHydrogen PeroxideIonsMembrane ProteinsNickelnickel sulfateProtozoan ProteinsReactive Oxygen SpeciesRNA, Messenger

Identifiers

PMID25001407
PMCPMC4187627
OpenAlexW2108824441

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.