Evidence map›Paper›PMID 25001086›Full record

ArticleNature communications2014

A hydrophobic barrier deep within the inner pore of the TWIK-1 K2P potassium channel.

Prafulla Aryal, Firdaus Abd-Wahab, Giovanna Bucci, Mark S P Sansom, Stephen J Tucker

Open access · hybridAbstract read
In one paragraph

Article in Nature communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed
6.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 134 citations in OpenAlex.

  1. Article
  2. Gating crosstalk in potassium channels.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Structure-Function Relationships of KAdvances in experimental medicine and biology · 2026
    Review
  9. Article
  10. Article
  11. Cryo-EM structure of the human THIK-1 K2P KNature structural & molecular biology · 2025
    Article
  12. Structure of the human TWIK-2 potassium channel and its inhibition by pimozide.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Prafulla Aryal1] Clarendon Laboratory, Department of Physics, University of Oxford, Oxford OX1 3PU, UK [2] Department of Biochemistry, University of Oxford, Oxford OX1 3QX, UK [3] OXION Initiative in Ion Channels and Disease, University of Oxford, Oxford OX1 3PT, UK.
Firdaus Abd-WahabClarendon Laboratory, Department of Physics, University of Oxford, Oxford OX1 3PU, UK.
Giovanna BucciClarendon Laboratory, Department of Physics, University of Oxford, Oxford OX1 3PU, UK.
Mark S P Sansom1] Department of Biochemistry, University of Oxford, Oxford OX1 3QX, UK [2] OXION Initiative in Ion Channels and Disease, University of Oxford, Oxford OX1 3PT, UK.
Stephen J Tucker1] Clarendon Laboratory, Department of Physics, University of Oxford, Oxford OX1 3PU, UK [2] OXION Initiative in Ion Channels and Disease, University of Oxford, Oxford OX1 3PT, UK.
University of Oxford · GB

Funding

Biotechnology and Biological Sciences Research Council B19456Biotechnology and Biological Sciences Research Council BB/H000267/1Biotechnology and Biological Sciences Research Council BB/I019855/1Biotechnology and Biological Sciences Research Council BB/L002558/1Biotechnology and Biological Sciences Research Council BBS/B/16011Biotechnology and Biological Sciences Research Council BEP17032Wellcome Trust 084655
6 · The paper itself

Abstract

Recent X-ray crystal structures of the two-pore domain (K2P) family of potassium channels have revealed a unique structural architecture at the point where the cytoplasmic bundle-crossing gate is found in most other tetrameric K(+) channels. However, despite the apparently open nature of the inner pore in the TWIK-1 (K2P1/KCNK1) crystal structure, the reasons underlying its low levels of functional activity remain unclear. In this study, we use a combination of molecular dynamics simulations and functional validation to demonstrate that TWIK-1 possesses a hydrophobic barrier deep within the inner pore, and that stochastic dewetting of this hydrophobic constriction acts as a major barrier to ion conduction. These results not only provide an important insight into the mechanisms which control TWIK-1 channel activity, but also have important implications for our understanding of how ion permeation may be controlled in similar ion channels and pores.

Indexed as

AnimalsHumansHydrophobic and Hydrophilic InteractionsLipid BilayersMolecular Dynamics SimulationMutagenesis, Site-DirectedPotassium Channels, Tandem Pore DomainProtein ConformationWaterXenopusKCNK1 protein, humanLipid BilayersPotassium Channels, Tandem Pore DomainWater

Identifiers

PMID25001086
PMCPMC4102122
OpenAlexW2104158553

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.