Evidence map›Paper›PMID 25000823›Full record

ArticleThe journal of physical chemistry. A2014

Direct determination of resonance energy transfer in photolyase: structural alignment for the functional state.

Chuang Tan, Lijun Guo, Yuejie Ai, Jiang Li, Lijuan Wang, Aziz Sancar, Yi Luo, Dongping Zhong

Abstract read
In one paragraph

Article in The journal of physical chemistry. A, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Chuang TanDepartment of Physics, Department of Chemistry and Biochemistry, and Programs of Biophysics, Chemical Physics, and Biochemistry, The Ohio State University , 191 West Woodruff Avenue, Columbus, Ohio 43210, United States.
Lijun Guo
Yuejie Ai
Jiang Li
Lijuan Wang
Aziz Sancar
Yi Luo
Dongping Zhong

Funding

Functional Dynamics and Molecular Mechanism of PhotolayseR01GM074813 · NIGMS · OHIO STATE UNIVERSITY · PI ZHONG, DONGPING · 2007 to 2016
$2.6M
NIGMS NIH HHS GM074813NIGMS NIH HHS R01 GM074813
6 · The paper itself

Abstract

Photoantenna is essential to energy transduction in photoinduced biological machinery. A photoenzyme, photolyase, has a light-harvesting pigment of methenyltetrahydrofolate (MTHF) that transfers its excitation energy to the catalytic flavin cofactor FADH¯ to enhance DNA-repair efficiency. Here we report our systematic characterization and direct determination of the ultrafast dynamics of resonance energy transfer from excited MTHF to three flavin redox states in E. coli photolyase by capturing the intermediates formed through the energy transfer and thus excluding the electron-transfer quenching pathway. We observed 170 ps for excitation energy transferring to the fully reduced hydroquinone FADH¯, 20 ps to the fully oxidized FAD, and 18 ps to the neutral semiquinone FADH(•), and the corresponding orientation factors (κ(2)) were determined to be 2.84, 1.53 and 1.26, respectively, perfectly matching with our calculated theoretical values. Thus, under physiological conditions and over the course of evolution, photolyase has adopted the optimized orientation of its photopigment to efficiently convert solar energy for repair of damaged DNA.

Indexed as

Energy TransferDeoxyribodipyrimidine Photo-LyaseEscherichia coliEscherichia coli ProteinsFlavin-Adenine DinucleotideFolic AcidOxidation-ReductionRiboflavinSpectrum Analysis5,11-methenyltetrahydrohomofolateDeoxyribodipyrimidine Photo-LyaseEscherichia coli Proteinsfactor 420Flavin-Adenine DinucleotideFolic AcidRiboflavin

Identifiers

PMID25000823
PMCPMC4234433

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.